Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0571 ATGTTGGATTATGAATGGGGAAATCCGTCCACTATAATGCTCACCGGAAACGACGAATCTGCTGCAGCCGCCGCCGCAGAATCTGAACAGACGCACCGGCAAATTTTCGACCACTACAATTCTCACCCGTTCTTACCCGACCACCTTATTTCTCAAGCTCCACCGGGACCCACAACGACCACTACCACCACAACCTCTGATTTCTCTCTTGTACACCACCATCAACAATTTCACTTGCAACCCCATCACCATATCCACCACCACCACCACCAACAACAACAACAACATTATCTCTTTGACACACTCGCCTTCTCCGTCGCGTCGTCGTCTCATTTCCCTCCGGCACAACCACAACCACCAGCACGGTCACATCATTCCATGTTCTCCATGGACCCGCTCCCTACGGTCAACGCCGGCAACTGCGGACCTGATGGTGGGCTTGTGTTGGTGCCCAAGTCTGAAGATGTGGGTCGGTCCATGGACTTCTCGGTGTCTCGAATTGGACTCGACCTAGGCGGCCGAACGTACTTCTCCAGCTCCGAGGACGACTTCGTGAGCCGGCTCTACCGCCGGCCCAGGCCACTGGAACCGGGTTCAACTATGTCGTTCAACAACAACTCGCCGAGATGTCAAGCCGAAGGATGCAATGCCGATCTCTCTCACGCGAAGCACTATCACCGCCGACACAAGGTTTGCGAGTTTCACTCCAAGGCTGCCACCGTCATCACGGCCGGGTTGACTCAGCGATTCTGCCAGCAATGCAGCAGGTTTCATCTTCTTTCGGAGTTTGATAACGGAAAACGAAGCTGCAGGAAAAGATTGGCAGATCATAATCGTCGCAGAAGAAAAACTCAACAACAACAACCACCACTACCACCTCAAGAAACCCAGAAATCTCAACTCGAAAAGCCTCGAAACTCTACTTTGGACAATATTGTAGCAAAAGGGTCACCTCCAGATTCGGGAATCCAGTCATCCTCATCGGTGATGGTGGCGGTGTCGCCGCCAGATTATTTCCAGCAAAAGCCATATCATCAAAACGCAACATCAAGGACATTGTTTTTCTCAAGTGGGTAG 1077 0.519 MLDYEWGNPSTIMLTGNDESAAAAAAESEQTHRQIFDHYNSHPFLPDHLISQAPPGPTTTTTTTTSDFSLVHHHQQFHLQPHHHIHHHHHQQQQQHYLFDTLAFSVASSSHFPPAQPQPPARSHHSMFSMDPLPTVNAGNCGPDGGLVLVPKSEDVGRSMDFSVSRIGLDLGGRTYFSSSEDDFVSRLYRRPRPLEPGSTMSFNNNSPRCQAEGCNADLSHAKHYHRRHKVCEFHSKAATVITAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQQQQPPLPPQETQKSQLEKPRNSTLDNIVAKGSPPDSGIQSSSSVMVAVSPPDYFQQKPYHQNATSRTLFFSSG 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0571 358 SUPERFAMILY SBT domain 208 287 IPR036893 GO:0003677|GO:0005634
Lele41g0571 358 FunFam Squamosa promoter-binding-like protein 14 201 271 - -
Lele41g0571 358 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 194 322 IPR044817 GO:0003677
Lele41g0571 358 MobiDBLite consensus disorder prediction 285 329 - -
Lele41g0571 358 Coils Coil 267 287 - -
Lele41g0571 358 MobiDBLite consensus disorder prediction 276 329 - -
Lele41g0571 358 Gene3D - 205 271 IPR036893 GO:0003677|GO:0005634
Lele41g0571 358 ProSiteProfiles Zinc finger SBP-type profile. 207 284 IPR004333 GO:0003677
Lele41g0571 358 Pfam SBP domain 210 283 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0571 Lele-ChrLele41 14863102 14864838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0571 1 257 SBP-box Gene Family AT1G02065 44.906 3.11e-57 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele41g0571 SBP 1.1e-30 No_clan