Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0564 ATGAGTCAGTGTGTTCCTAGCTGGGATTTGGACGAAAATCCTACAGTTCCCAAAGTTTCTCTCCTTTCAAATTCCAACAATTCCACAGCTCCTGATGTTCCCATGTTAGACTACGAAGTTGCAGAGCTTACATGGGAAAATGGGCAGCTCTCCATGCATGGTTTGGGTATGCCAAGAGTACCGGAGAAACCCATCTCCGCCGCCGGCGCAACAGCTGCCAGGTCCACGGCTCCTTCTTCTAAGTACGCATGGGAGAAGCCTCGTGCGAGTGGTACGTTGGAGTCCATAGTCAACCAAGCCACTCGCTTTCCCCACCGTAGCAAATCCGTCTTCGACGTCGGCGCCGCCGCTGAGGGAGATGACTTAGTGCCGTGGTTTGATCCCCAGAGAGCGGCGGCGGTAATGGCTACCGCTTCTCCGGTGGCGGCGGCGGCGTCGAATACGATGACCATGGACGGCATGGTGCCTTGTTCAAATCGAAAGGACGAGCAGCAGACCACGCAGGTTATGGACTCAGTGCCCTGTGGTGGTGGCGGCGGCGGCGCGCGTGGCACGTGCGGAGTGGGCTGTTCCGCACGTGTGAGGTCCTGTAGGGGGACCGCCAACAAAGACGATGAGGCACTCTTGGCGGCGAAACGAGCGAGGGTGGCGCGTGTGCCTGGAGCTCATGAGTGGAGTAGCAGAGGTCCAAGTGTGAGTGGAAGTGCTACGTTTGGAGGAGAAAACCAGCACGTGACGTTGGACACGTGCGATAAGGGATTGGGGATGGGTTTCATTTCCACGTCGATGGGTTCGCCGGAAAACACCAGCTTCGCTAAGCGGTGCACCAAAACTACCACCGCCGACGACCACGATTCTGTTTCGCATAGCCGACCACAGAAAGAGACAAGTGATGAGGAGGACGAAAAGAAAGGAATAGGAAAATCAGTGTCCACTAAAAGTAAGGCTGCAGCTATACACAACCGATCTGAAAGGAAAAGGAGGGATAAGATAAACCAGAGGATGAAGACATTGCAAAAGCTGGTCCCAAATTCCAGCAAGACAGATAAAGCTTCAATGCTGGATGAGGTGATAGAGTATCTAAAGCAATTGCAAGCACAAGTGAGCATGATGAGTAAAATGAATATGTCAGCCATGATGCTACCAATGGCCGTGCAGCAACAGCTTCAAATGTCTATGATGCCTCCCATGAACATGGGTATGGGTATGGGTATGGGTTTGGGAATGGGAATGGGTATTGACATGAATGCCATCAGTCGGCATGCTAATAGCATTGCCGGCATCCCACCGGTTTTCCATCCTCCAGCGCTCTTGCCTTTGGTTTCATGGGATGCCTTACTGGGCACCACTGATCGACTACAAGGAGTTCCGTCAACAACAGTGGTGCCTGACCCATTATCCACATTTTTTACGGGGCAATCACAGCCTATGACCATGGATGCATACAATAGGATGGTTGCCATGTATCAGCAGTTATACCAACATCCAGCTTCTACTTCAAAGAGCTGA 1509 0.5242 MSQCVPSWDLDENPTVPKVSLLSNSNNSTAPDVPMLDYEVAELTWENGQLSMHGLGMPRVPEKPISAAGATAARSTAPSSKYAWEKPRASGTLESIVNQATRFPHRSKSVFDVGAAAEGDDLVPWFDPQRAAAVMATASPVAAAASNTMTMDGMVPCSNRKDEQQTTQVMDSVPCGGGGGGARGTCGVGCSARVRSCRGTANKDDEALLAAKRARVARVPGAHEWSSRGPSVSGSATFGGENQHVTLDTCDKGLGMGFISTSMGSPENTSFAKRCTKTTTADDHDSVSHSRPQKETSDEEDEKKGIGKSVSTKSKAAAIHNRSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMSKMNMSAMMLPMAVQQQLQMSMMPPMNMGMGMGMGLGMGMGIDMNAISRHANSIAGIPPVFHPPALLPLVSWDALLGTTDRLQGVPSTTVVPDPLSTFFTGQSQPMTMDAYNRMVAMYQQLYQHPASTSKS 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0564 502 MobiDBLite consensus disorder prediction 277 309 - -
Lele41g0564 502 MobiDBLite consensus disorder prediction 276 332 - -
Lele41g0564 502 SMART finulus 321 370 IPR011598 GO:0046983
Lele41g0564 502 MobiDBLite consensus disorder prediction 318 332 - -
Lele41g0564 502 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 315 364 IPR011598 GO:0046983
Lele41g0564 502 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 40 501 IPR031066 -
Lele41g0564 502 Coils Coil 321 341 - -
Lele41g0564 502 FunFam transcription factor UNE10 isoform X1 310 375 - -
Lele41g0564 502 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 312 377 IPR036638 GO:0046983
Lele41g0564 502 Pfam Helix-loop-helix DNA-binding domain 320 365 IPR011598 GO:0046983
Lele41g0564 502 Gene3D - 311 377 IPR036638 GO:0046983
Lele41g0564 502 CDD bHLH_AtPIF_like 315 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0564 Lele-ChrLele41 14628151 14638233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0564 1 486 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 47.358 1.61e-95 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele41g0564 HLH 1.5e-13 No_clan