Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0533 ATGGCTTTTTCTGCAGCTTGGATCACTTCCCTCTCATGTTCTTCGCCTGTAAAACAAGCCCCAGGTGCTACTCAATGGCTCGAATTTGCGTTCCTCTCTCCATGTCCTCAAAGAGCTCTCTTGTCCGCCACTGATGTTGTGCTCATCCTCGTCCTCTTCGCCCTTGCCGTCAAGAAGCTCTGTTCTAGGTTCCCCTCTAATGGCGGCGACCCTGCATCTGAACTTGACAAGCCCCTTATCAGACATAACAGAGATTTTATCAGAACAACAACGTGGTTTAAGCTAACGTTAATTGTGACGGTTGTTTCGACTATACTGTACGCTGTTGCGAGTGTTCTAGTATTTGTCAGAGACACCCAAGTTCCATGGAAGCAAGTCGATGGATTATTTTGGTTAGTTCAGGCGGTGACTCATGCGATCCTCGCAATGTTAATCATCCATGAAAGGAGATTTCAAGCTGTTTCTCACCCTTTTCCACTTCGAATCTTTTGGGTTATGAACTTCGTTATCACTTGTTTGTTCGTAGTTTCTGGGGCTGTGCGTTTGGTCTCTGTGGAAGAAACTGAAGGAGGCTTTGACTTTAGGACTGATGATACTGTGTGTTTTATTTCGTTCCCTCTTTCTCTTTTTCTCTCTCTTGTTGCCATTAAAGGAACTACTGGTATCAGCTTCACACAGGAAACTGAATCGCTAATTGGTGGTGAAACTGATGTGAAATCAAACGTGACTGGTTTTGCCTCAGCTTCTTTAGTATCCAAGGCGTTTTGGCTATGGATAAATCCATTGTTGAGTAAAGGTTACAAGTCGCCGTTGAAGATTGTTGAAGTGCCAACACTTTCACCAAAACACAGAGCTGAAAGAATGTCAGCTTTGTTTGAACAGAAATGGCCTAAGCCACAAGAAAGTTCGAAGCATCCTGTTCTAATCACGCTGCTTCGATGCTTCTGGAAGGAAGCAGCATTCACCGCTTTTCTTGCTGTTGTTCGACTCAGTGTTATGTTCATAGGTCCAGTTCTTATCCAAAGCTTCGTTGATTTCACAGCAGGTAAGAGAAGCTCTATGTCTGAAGGATACTACCTCGTGTTAATCTTGCTCGTTGCGAAATTCGTTGAAGTCTTAGCCACTCATCATTTCAACTTCAACTCTCAGAAGATGGGAATGCTTATCCGATGCTCTCTTATTACATCATTGTACAAGAAAGGGTTAAGGTTGTCTTGTTCTGCAAGACAGGACCATGGTATTGGAACTATAGTGAATTATATGGCTGTGGATGCACAACAGCTTTCTGATATGATGTTGCAGCTTCATGCTGTGTGGATGATGCCATTACAAGTTGGCATTGCCTTATTTCTGCTTTACAAATACTTAGGAGCTGCAGTGGTCACAGCTTTACTGGGAATCTTGGGTGTTCTTGTGTTTGTCATATTCGGTACTCGAAGAAACAACCGGTTCCAGTTCAATGTGATGAAGAATCGCGATTCCAGAATGAAGGCTGTTAATGAGATGCTAAATTACATGAGAGTGATCAAGTTCCAAGCATGGGAAGAGCATTTCAGTAAGAGGATTATGGTTTTTCGTGAGTCGGAATTCAGCTGGCTTTCTAAGTTTATGTATTCGATTTCCGGGAATATTATTGTGATGTGGAGCACACCACTATTGATATCGAATCTAACGTTTGGGACAGCGATTTTGCTTGGAGTTCCACTCGATGCAGGCACGGTTTTCACCACAACAACAATCTTTAAAATATTGCAAGAACCTATTAGGACATTCCCACAATCAATGATCTCTCTTTCACAAGCCATGATATCACTTGGGAGGTTGGATAGGTATATGATGAGTAAGGAATTATCAGATAATTCGGTAGAGAGAGAGGAAGTGTGCGATGGACAAACTGCTGTAGAGGTCAAAGATGGCATTTTTAGCTGGGATGATGATGAAAGTAAGGGGGATTATGACTTGAAAAACGTTAATTTGAATATAAAAAAGGGCGATCTTACCGCTATTGTTGGCACCGTCGGCTCGGGAAAATCTTCTCTCCTAGCATCAATTCTTGGTGAGATGCACAAAGTTTCTGGCAAGGTTCGGGTTTGTGGGAGTACGGCTTACGTAGCTCAAACATCATGGATTCAAAATGGGACAATTCAGGATAATATCCTGTATGGATTACCAATGGACAGACAGAAATACAATGAAGTTGTGAGAGTCTGTTGCTTGGACAAGGACTTGGAAATGATGGAGGACGGCGATCAGACGGAGATTGGAGAGCGTGGCATCAACCTTAGTGGAGGACAGAAGCAGAGAATACAACTTGCTAGGGCCGTATATCAAGACTGTGATGTATATCTTCTTGATGATGTCTTCAGCGCTGTCGATGCTCATACCGGCTCCGCAATATTCAAGGAATGTGTTAGGGGAGCTCTAAAAGCCAAGACTGTTATTCTTGTAACACACCAAGTAGACTTCCTGCATAATGTTGACCTTATAATGGTGATGAGAGACGGAATGATAGTGGAATTGGGCAAGTATAACGATCTATTAAATTCTGGAATGGATTTTGGAGATCTGGTAGCAGCGCATGAGACTTCTATGGAACTTGTAGAACAAGGCAAAGTCATGCCTGGTGAAAATTCCCCCAGACCATCCAAATCTCCTAGATCTCCAAAGCCAGCTTCTAAATTAACAGAGACCAATGGTGAAAGCAATTCTCTCGACCAACCCAAGGCTGCCGGCAAGGAAAATTCTAAACTCATCAAAGACGAAGAGAGGGAAACTGGCAAAGTGAGCCTGCATATTTATAAATTGTATTGTACTGAGGCTTATGGGTGGTGGGGCATTACCGGAGTAATTCTCATTTCTTTGATATGGCAAGTATCTTTGATGGCTGGTGATTATTGGCTGGCATATGAAACCTCGGAAGAGCAAGCTCGAGTCTTTAACCCGTCTCTTTTTATCTCCATCTACGCCATTATTGCTGCAGTTTCAGTTGTTTTGGTGATTATAAGATCCTTCTCTGTCACCATCTTGGGGCTTAAGACAGCACAGATTTTCTTCTCTCAGATTCTTAACAGCATCCTTCATGCACCCATGTCTTTCTTTGATACCACACCTTCCGGAAGAATTTTAAGTAGGGCATCCACTGATCAGACTAATGTTGATGTGTTTCTCCCATTGTTTGTGGGTATTGTGATTTCCATGTACATCACGGTGCTCAGCATCTTCATTGTGACATGTCAAAATTCTTGGCCAACAGTTTTCTTGCTGATTCCTCTGATTTGGTTGAATATATGGTATCGGGGTTATTTCCTTTCTTCGTCTCGCGAATTGACTCGCTTGGATTCAATCACAAAAGCACCGGTGATTCATCACTTCTCAGAAAGCATTTCAGGGGTCATGACAATCCGTGCGTTCAGAAAGCAGAGGGAATTTTGTGAAGAAAATGTTAAGCGAGTGAATGAAAATCTGCGCATGGATTTCCACAACAACGGTTCCAATGAGTGGTTGGGTTTTCGCTTAGAATTGCTCGGCAGCTTGGTCTTTTGTATTTCTACTATGTTCATGATTATATTACCCAACAATATCATAAAGCCAGAAAACATTGGCTTATCTCTCTCTTATGGCCTGTCTCTGAATGCTGTGTTGTTCTGGGCCATATACATGAGTTGCTTCATAGAGAACAGAATGGTATCTGTGGAGAGGATTAAGCAGTTCACAAAAATTCCATGTGAAGCAGAATGGCATATTAAAGATCGCCTACCTCCCCCGAATTGGCCTGCCCACGGCCATGTTGACATCAGAGACTTGCAGGTTAGGTATCGCGCCAACACTCCTTTGGTTCTTAAAGGCATAACATTGAGCATTAGTGGGGGAGAAAAGATTGGTGTCGTTGGAAGAACAGGAAGTGGGAAATCTACATTAATCCAAGTGTTCTTCAGGCTAGTAGAACCTTCAGGAGGAAGAATAATCATAGATGATATCGACATAACTGCATTAGGCCTTCACGGCCTCAGGTCTCGTTTCGGTATCATTCCCCAGGAGCCCGTTCTTTTTGAGGGCACTGTTAGGAGCAACATCGATCCAACTGGACAATATTCAGATGAAGACATATGGAAGAGCTTGGAACGTTGTCAACTGAAAGATGCCGTGGCTTCCAAGACAGAGAAACTGGACTCTTCCGTGGTTGATAATGGAGAGAACTGGAGTGTGGGACAGAGGCAGTTACTGTGTTTGGGGAGGGTTATGCTTAAGCGAAGCCGGCTCTTGTTCTTGGATGAAGCGACGGCTTCAGTGGATTCACAAACTGATGCCGTGATTCAAAAGATAATCAGAGAGGACTTTGCAGCATGCACAATCATTAGCATTGCTCACAGAATACCAACGGTCATGGACTGTGATAGGGTTCTAGTCATAGATGCAGGGAGAGCAAAAGAATTTGATAAACCCTCCAAGTTGCTTCAGAGGCCATCATTATTTGGGGCATTAGTTCAAGAATATGCCAATCGCTCCTCAGAGCTCTAA 4518 0.4314 MAFSAAWITSLSCSSPVKQAPGATQWLEFAFLSPCPQRALLSATDVVLILVLFALAVKKLCSRFPSNGGDPASELDKPLIRHNRDFIRTTTWFKLTLIVTVVSTILYAVASVLVFVRDTQVPWKQVDGLFWLVQAVTHAILAMLIIHERRFQAVSHPFPLRIFWVMNFVITCLFVVSGAVRLVSVEETEGGFDFRTDDTVCFISFPLSLFLSLVAIKGTTGISFTQETESLIGGETDVKSNVTGFASASLVSKAFWLWINPLLSKGYKSPLKIVEVPTLSPKHRAERMSALFEQKWPKPQESSKHPVLITLLRCFWKEAAFTAFLAVVRLSVMFIGPVLIQSFVDFTAGKRSSMSEGYYLVLILLVAKFVEVLATHHFNFNSQKMGMLIRCSLITSLYKKGLRLSCSARQDHGIGTIVNYMAVDAQQLSDMMLQLHAVWMMPLQVGIALFLLYKYLGAAVVTALLGILGVLVFVIFGTRRNNRFQFNVMKNRDSRMKAVNEMLNYMRVIKFQAWEEHFSKRIMVFRESEFSWLSKFMYSISGNIIVMWSTPLLISNLTFGTAILLGVPLDAGTVFTTTTIFKILQEPIRTFPQSMISLSQAMISLGRLDRYMMSKELSDNSVEREEVCDGQTAVEVKDGIFSWDDDESKGDYDLKNVNLNIKKGDLTAIVGTVGSGKSSLLASILGEMHKVSGKVRVCGSTAYVAQTSWIQNGTIQDNILYGLPMDRQKYNEVVRVCCLDKDLEMMEDGDQTEIGERGINLSGGQKQRIQLARAVYQDCDVYLLDDVFSAVDAHTGSAIFKECVRGALKAKTVILVTHQVDFLHNVDLIMVMRDGMIVELGKYNDLLNSGMDFGDLVAAHETSMELVEQGKVMPGENSPRPSKSPRSPKPASKLTETNGESNSLDQPKAAGKENSKLIKDEERETGKVSLHIYKLYCTEAYGWWGITGVILISLIWQVSLMAGDYWLAYETSEEQARVFNPSLFISIYAIIAAVSVVLVIIRSFSVTILGLKTAQIFFSQILNSILHAPMSFFDTTPSGRILSRASTDQTNVDVFLPLFVGIVISMYITVLSIFIVTCQNSWPTVFLLIPLIWLNIWYRGYFLSSSRELTRLDSITKAPVIHHFSESISGVMTIRAFRKQREFCEENVKRVNENLRMDFHNNGSNEWLGFRLELLGSLVFCISTMFMIILPNNIIKPENIGLSLSYGLSLNAVLFWAIYMSCFIENRMVSVERIKQFTKIPCEAEWHIKDRLPPPNWPAHGHVDIRDLQVRYRANTPLVLKGITLSISGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDDIDITALGLHGLRSRFGIIPQEPVLFEGTVRSNIDPTGQYSDEDIWKSLERCQLKDAVASKTEKLDSSVVDNGENWSVGQRQLLCLGRVMLKRSRLLFLDEATASVDSQTDAVIQKIIREDFAACTIISIAHRIPTVMDCDRVLVIDAGRAKEFDKPSKLLQRPSLFGALVQEYANRSSEL 1505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0533 1505 CDD ABC_6TM_ABCC_D1 321 608 IPR044746 GO:0140359
Lele41g0533 1505 SUPERFAMILY ABC transporter transmembrane region 943 1243 IPR036640 GO:0005524|GO:0016020
Lele41g0533 1505 Pfam ABC transporter transmembrane region 979 1191 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele41g0533 1505 Pfam ABC transporter transmembrane region 323 587 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele41g0533 1505 Gene3D ABC transporter type 1, transmembrane domain 908 1244 IPR036640 GO:0005524|GO:0016020
Lele41g0533 1505 Gene3D ABC transporter type 1, transmembrane domain 290 616 IPR036640 GO:0005524|GO:0016020
Lele41g0533 1505 FunFam ABC transporter C family member 3 1246 1497 - -
Lele41g0533 1505 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 246 1499 - -
Lele41g0533 1505 Pfam ABC transporter 654 787 IPR003439 GO:0005524
Lele41g0533 1505 Gene3D - 1247 1495 IPR027417 -
Lele41g0533 1505 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 948 1226 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele41g0533 1505 Pfam ABC transporter 1280 1428 IPR003439 GO:0005524
Lele41g0533 1505 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1265 1497 IPR003439 GO:0005524
Lele41g0533 1505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 631 857 IPR027417 -
Lele41g0533 1505 CDD ABCC_MRP_domain2 1261 1481 - -
Lele41g0533 1505 FunFam ABC transporter C family member 5 909 1244 - -
Lele41g0533 1505 ProSitePatterns ABC transporters family signature. 761 775 IPR017871 GO:0005524|GO:0016887
Lele41g0533 1505 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 320 600 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele41g0533 1505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1255 1496 IPR027417 -
Lele41g0533 1505 Gene3D - 628 863 IPR027417 -
Lele41g0533 1505 CDD ABC_6TM_ABCC_D2 946 1238 IPR044726 GO:0140359
Lele41g0533 1505 MobiDBLite consensus disorder prediction 888 909 - -
Lele41g0533 1505 SUPERFAMILY ABC transporter transmembrane region 304 612 IPR036640 GO:0005524|GO:0016020
Lele41g0533 1505 FunFam ABC transporter C family member 10 303 616 - -
Lele41g0533 1505 FunFam ABC transporter C family member 4 617 877 - -
Lele41g0533 1505 MobiDBLite consensus disorder prediction 870 918 - -
Lele41g0533 1505 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 634 859 IPR003439 GO:0005524
Lele41g0533 1505 Coils Coil 1134 1154 - -
Lele41g0533 1505 SMART AAA_5 1289 1482 IPR003593 -
Lele41g0533 1505 SMART AAA_5 663 844 IPR003593 -
Lele41g0533 1505 CDD ABCC_MRP_domain1 634 835 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0533 Lele-ChrLele41 8079668 8085819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0533 626 852 Calmodulin-binding Proteins AT2G36910 29.730 9.09e-24 107