Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0528 ATGGCTTCCCCTCCTCCTTCTCCTGTTGACTCCTCCACCACCACCCCTCCCACTGATCCGCCCACCGCCGTCCCTCTCGCGGTTGCTGTTCCTCCGGCTTTGCCCTCTTCGCAGCCTTCGTCATCCTCTCGCCGCCTTCCGCCACCGTGCTGGTCTGCTGAGGAGACCGTCGCTCTCATCGACGCGTACCGTCACAAGTGGTATTCTCTTGGCCGGGGTAATCTCAAGGCCACGCATTGGCAAGATGTCGCCGACGCCGTTACGTCCCGCTGCCCTGGTGCTTCGCCTCCCAAAACCGCCGTCCAGTGCCGCCACAAGATGGAGAAGCTCCGGAAGCGGTACCGCACGGAGATCCAACGCGCGTGCAACCTGCCTGTTGCGAGGTTCAAATCCGCTTGGATTCACTTCAAGCGGATGGATACCATGGAGAAAGGCCCCTCCCTTGTCAAACCTGAGAACGATTCGGATGATAGCCCTGATGAGTTTGACGGCGATGAGGATAATGACTTGTACGAGGAATTCAGAAGCGGTAGTGGGTCCAATACGAGGAGCTTGAATAAGTTGTATCGGACTGGCATGGGCGGCAGCACCGTCAACGGCAGCGGTGGATTTCGGATTCGAATTACCGATGGGGTAAGCATTGCACAACCTGGGAATTCCAAATTATATGGGAAATTTTCTGATCAGAACTATAACTATAAAAATAACAACCCCGGTTCAAAATCTGGGCATGGCTTTAATAGTCCCAATTATGAAACTAGGGTTTTGAAAGAAAGAAGTGGATTGGGGAAAAGAGAAAGAGAAAGAGGGAGGGAGGGAGATCCAGTGAGTGAGATGGTGTGTGCAATTAAGGTTTTGGGAGATGGGTTTGTGAAGATGGAACAGATGAAGATGGAGATGGCGAGGGAGATTGAGAGCATGCGTATGGAGATGGAGATGAAGCGTACTGAGATGATTCTGGAATCGCAGCAGAGGATTGTGGAGGCATTTGCAAAAGCAGTTTCAGAGAAGAAGACAGAGAGATTGCCTTCTTCACCTTCAGAATCATAG 1050 0.5229 MASPPPSPVDSSTTTPPTDPPTAVPLAVAVPPALPSSQPSSSSRRLPPPCWSAEETVALIDAYRHKWYSLGRGNLKATHWQDVADAVTSRCPGASPPKTAVQCRHKMEKLRKRYRTEIQRACNLPVARFKSAWIHFKRMDTMEKGPSLVKPENDSDDSPDEFDGDEDNDLYEEFRSGSGSNTRSLNKLYRTGMGGSTVNGSGGFRIRITDGVSIAQPGNSKLYGKFSDQNYNYKNNNPGSKSGHGFNSPNYETRVLKERSGLGKRERERGREGDPVSEMVCAIKVLGDGFVKMEQMKMEMAREIESMRMEMEMKRTEMILESQQRIVEAFAKAVSEKKTERLPSSPSES 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0528 349 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 20 335 IPR044823 -
Lele41g0528 349 FunFam Trihelix transcription factor ASIL2 51 116 - -
Lele41g0528 349 MobiDBLite consensus disorder prediction 156 170 - -
Lele41g0528 349 Pfam Myb/SANT-like DNA-binding domain 49 142 IPR044822 -
Lele41g0528 349 MobiDBLite consensus disorder prediction 144 184 - -
Lele41g0528 349 Coils Coil 297 317 - -
Lele41g0528 349 SMART 118neu2 58 147 IPR006578 -
Lele41g0528 349 CDD SANT 51 110 IPR001005 -
Lele41g0528 349 MobiDBLite consensus disorder prediction 1 26 - -
Lele41g0528 349 Gene3D - 51 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0528 Lele-ChrLele41 7977179 7978228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0528 2 142 Trihelix Transcription Factor Family AT3G14180 34.459 4.69e-19 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele41g0528 Myb_DNA-bind_4 7.2e-19 CL0123