Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0508 ATGTGTGAACTTGTTAAGTCTGGAAAGCTTGAGAGAATCTATGTCTCCAAACAAGATAGTGTTCTAGTGAAGGTGTTATTGTGGCTAGTATTAGCAATTGGAGGCCTTGAACTTGCATGCATCTTTCTCTTTTGGTGTCTAACATGGAAAAAGTCGAGTAAACAGCAGAATTATGATCATCTTACTGGAACTGGGTTTAGAAAATATATCTACTCTGAGTTGAAAGAAGCAACAAGAGGTTTCAGTGAAGAGATTGGAAGGGGTGCTGGAGGAATCGTATACAAGGGAACACTAAAAGATGGGCGAGTTGCGGCAATCAAGAGACTGAACGAAGCAAACCAAATAGAAAGTGAGTTTCTTGCAGAAGTCAACTTGATAGGAAGGCTGAACCACATGAACTTGATTGACATGTGGGGGTATTGTGCAGAAGGGAAGTACAGAATGTTGGTTTATGAGTACATGGAAAACGGTTCTTTAGCAGAAAATCTTGAATCCAGCAAGTCACTTGATTGGAGAAAGAGTTATGGAGTTGTAGTGTTGGAGATGATAACAGGAAAAAGCTTGAGGGTTGATGGACCCGATCACTCACATCAGGGTAGGCTAGTGACGTGGGTGAGGGAGAAGAAGAACAAAGGAGAAGGAAAGGCATCCTGGGTGGAACAGATTGTGGATCCAACGGTTGAGGGAAGCTTTGAGATGAAGACGATGGAGGTTGTTGTTTTGTTTTTTGTTTTTTTTCCCGTGTTCTCTTTCCTTCTCTCTCGGTCTGATAATAAGCGGATATCTGATTTCAATGAGAGACATGGACCAGACAAGCATAAGGGTAAAGTGACATTTCAAGGCATAATTCAGGGGGAAGTGGCTGTTTTGCAAATGGGATTGTTGTCTTGTAGCTATTACGTGTATTGGAGCTAG 915 0.4186 MCELVKSGKLERIYVSKQDSVLVKVLLWLVLAIGGLELACIFLFWCLTWKKSSKQQNYDHLTGTGFRKYIYSELKEATRGFSEEIGRGAGGIVYKGTLKDGRVAAIKRLNEANQIESEFLAEVNLIGRLNHMNLIDMWGYCAEGKYRMLVYEYMENGSLAENLESSKSLDWRKSYGVVVLEMITGKSLRVDGPDHSHQGRLVTWVREKKNKGEGKASWVEQIVDPTVEGSFEMKTMEVVVLFFVFFPVFSFLLSRSDNKRISDFNERHGPDKHKGKVTFQGIIQGEVAVLQMGLLSCSYYVYWS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0508 304 FunFam S-receptor-like serine/threonine-protein kinase 48 153 - -
Lele41g0508 304 PANTHER OS07G0415500 PROTEIN 18 172 - -
Lele41g0508 304 Pfam Protein kinase domain 82 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0508 304 ProSitePatterns Protein kinases ATP-binding region signature. 85 107 IPR017441 GO:0005524
Lele41g0508 304 ProSiteProfiles Protein kinase domain profile. 79 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0508 304 Gene3D Phosphorylase Kinase; domain 1 45 153 - -
Lele41g0508 304 SUPERFAMILY Protein kinase-like (PK-like) 56 172 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0508 Lele-ChrLele41 5299776 5301130 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0508 53 179 Receptor kinase-like Gene Family AT1G66910 40.310 4.08e-26 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele41g0508 Pkinase 1.9e-15 CL0016