Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0507 ATGTTGAGAAGGCCAGAAGATTCACACTTTTTGAAAATACACAAAGGAAATTTCTTTCGCTATGATCTTGGGACTTTCCCAAACTTTACCTATGATCAATGTAAAGATCTATGTTTGAACTTTTGTAACTGCAAAGGTTTTCAATATACTTTTGATGGTTCCCAATTTACATGTTACCCAAAGTACGTTTTGGTCAACGGAAACCTTCCTTCAGCTTTTAATACAGACTTTTACTTGAAAGTTCCCAAGTCCAGTTCATTTGAATTCTCTCATGAATTACCCAACACCAAGTGTGAAAATGTTAAATCTGTAAAGGTTAGGAGCCAAGGTAGTGTTTTGTTAAAGGTGCTACTATGGTTAGCGTTAGCAATTGGAAGCTTTGAAGTTGTCTTCATCTTCCTTGTTTGGCGTTTGACACGGGAAAAAACTAGCAAGAAGCATAGTTATGAATTTCTTACTGAAACTGGGTTTAGAAAATATAGCTACTCTGAATTGAAAGAAGCAACAAGAAGTTTCAGAGAAGAGATTGGAAGGGGTGCTGGAGGAATCGTATACAAGGGTATGCTAAAAGATGGGCGAGTTGCTGCAATCAAGAGACTCAACGAAGCAAACCAAATAGAAAGTGAGTTTCTTGCTGAAGCCAACTTAATAGGAAGGCTTAACCACATGAACTTGATTAGCATGTGGGGGTATTGTGCAGAAGGAAATCATAGAATGTTAGTGTATGAGTACATGGAAAATGGAAAAAGCTTGAGGGTTGATAGACCAGATCAATCGCATCAGGGGAGGCTAGTGACATTATTGAATGACAAGAAGAACAAAAAAGAACACAAGTTATCATCATCATGGGTGGAACAAATTGTGGATCCAACGTTTGAGGGAAGCTTTGACATGAAGACGATGGAGGTTTTGGTTACGGTAGCATTGCAGTGTGTTATGGAAGACAGGGACGCAAGGCCTACAATGGGTCGCGTGGTGGAGATGCTTCAAAATCATGATATTGACTCTCTTATGTAA 1017 0.3884 MLRRPEDSHFLKIHKGNFFRYDLGTFPNFTYDQCKDLCLNFCNCKGFQYTFDGSQFTCYPKYVLVNGNLPSAFNTDFYLKVPKSSSFEFSHELPNTKCENVKSVKVRSQGSVLLKVLLWLALAIGSFEVVFIFLVWRLTREKTSKKHSYEFLTETGFRKYSYSELKEATRSFREEIGRGAGGIVYKGMLKDGRVAAIKRLNEANQIESEFLAEANLIGRLNHMNLISMWGYCAEGNHRMLVYEYMENGKSLRVDRPDQSHQGRLVTLLNDKKNKKEHKLSSSWVEQIVDPTFEGSFDMKTMEVLVTVALQCVMEDRDARPTMGRVVEMLQNHDIDSLM 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0507 338 SUPERFAMILY Protein kinase-like (PK-like) 145 248 IPR011009 -
Lele41g0507 338 ProSitePatterns Protein kinases ATP-binding region signature. 176 198 IPR017441 GO:0005524
Lele41g0507 338 Pfam Protein kinase domain 173 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0507 338 Gene3D Phosphorylase Kinase; domain 1 134 241 - -
Lele41g0507 338 SMART tyrkin_6 170 329 IPR020635 GO:0004713|GO:0006468
Lele41g0507 338 Gene3D Transferase(Phosphotransferase) domain 1 242 336 - -
Lele41g0507 338 PANTHER OS07G0415500 PROTEIN 278 331 - -
Lele41g0507 338 CDD PAN_AP_plant 9 82 - -
Lele41g0507 338 ProSiteProfiles Protein kinase domain profile. 170 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0507 338 FunFam S-receptor-like serine/threonine-protein kinase 139 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0507 Lele-ChrLele41 5294698 5298026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0507 156 248 Receptor kinase-like Gene Family AT3G19300 50.000 6.15e-24 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele41g0507 Pkinase 7.9e-14 CL0016