Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0501 ATGGCCTCCTCCTTCCTGACTCTCCCAAAACCTTTCCTTTGCCCGCCTAAGTCTACCTTCTCTTCCTCTGACCGCAAACTTGCAGGCTTGCGGAAGAACTCATTGAGGGTTAATGCAATTGTGAAGAAATGGGAACCCACAAAGGTTTATGTAGTTTTCGGTTATTTTGCTTGTTGTGTGGTTCCGCAGGCTGACAGAGTTCTTGTTCGTTTGGATGAGCTTGAACAAAAAACTACTGGTGGAGTTTTGTTGCCAAAGTCAGCTGTTAAATTTGAGCGATATCTAATGGGAGAAATTCTTTCTGTTGGTGCAGATGTTCAAGAAGTAGAGGCTGGCAAGAAGGTTTTATTCTCAGACATGAATGCTTATGAGGTGGATTTGGGGACTGATGCAAAGCACTGCTTCTGTAAAGCAAGTGACTTATTGGCTGTGGTTGAGTAA 441 0.4376 MASSFLTLPKPFLCPPKSTFSSSDRKLAGLRKNSLRVNAIVKKWEPTKVYVVFGYFACCVVPQADRVLVRLDELEQKTTGGVLLPKSAVKFERYLMGEILSVGADVQEVEAGKKVLFSDMNAYEVDLGTDAKHCFCKASDLLAVVE 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0501 146 PANTHER 10 KDA HEAT SHOCK PROTEIN 60 144 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele41g0501 146 Pfam Chaperonin 10 Kd subunit 60 145 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele41g0501 146 SUPERFAMILY GroES-like 60 146 IPR011032 -
Lele41g0501 146 SMART Cpn10_2 59 145 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele41g0501 146 PRINTS 10kDa chaperonin signature 110 122 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele41g0501 146 PRINTS 10kDa chaperonin signature 132 145 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele41g0501 146 PRINTS 10kDa chaperonin signature 84 105 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele41g0501 146 PRINTS 10kDa chaperonin signature 60 75 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele41g0501 146 FunFam 10 kDa chaperonin 56 146 - -
Lele41g0501 146 Gene3D GroES chaperonin 59 146 IPR037124 GO:0006457
Lele41g0501 146 CDD cpn10 60 145 IPR020818 GO:0005524|GO:0006457|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0501 Lele-ChrLele41 5103807 5111129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0501 58 146 Calmodulin-binding Proteins AT5G20720 32.653 8.40e-10 53.5