Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0495 ATGCTTTGGGAGGACTTATCCAACATGGTTTTAAATGCTTCAAGTCTAAAATTGGACTCACCATGCATGTTGGAGCATGTAATGCTACCAGTGGGAATTGGGTTTTTATTAATATGGTTGATCCAAATGATAATAAAAGGTGTGGAACTTATAAGGAAGAAGAAGAACAAGGGCACAGAACAGAACACAGAGATTCTTCATCCCACTGTTCTGAAGTATGGTTTAGCTTACAAAACCAGTATATTTTGCTGCACTTTACTGCTTGCAATTCATATCTTTTTGCTTCTGATGATGGTAAAAGTTCAGACTCAGTGCAATTCAAAACTTTTGGCTTTTACATCAGAAACAGTTCTGGTTTTAGCATGGGCAATTGCATTGATATCAGTGTGGAAGATGCCAAAAGTCAATGTTAAGTTCCCTTGGATGATAAGATCATGGTGGATTTGCAGCTTCTTTTTGTGCATTATCAACTTAGGATTTCATAGCCATTTCAGGATCAGCAAAAGGATAGAGATTGGATTCATGGAATATGCAGATTTGCTTGGCCTGCTTGCTTCAACGCTTCTATTGGGAATTTCAATGAGGGGAAGAACTGGGATTGTGTTGATTGCTACAGATGGAATCTCTGAGCCACTTTTGAGTGAGAAAACCGGAAAAGATTCGGAATCTTCCAAAAGGGAATCTTTATATGGGAAATCTACTTTCATTCAACTCATTACCTTCTCATGGCTCAATCCTTTGTTTGCAGTAGGGTATAAGAAAGCTCTTGAACAAAGTGATATTCCTGATGTTGCCATTGAGGATTCTGCAGAATTTCTATCTTCATGCTTTGATGAAAGCCTAAGAAAAGTCAAGGAGGCTGATGGGGCCACAAATCCATCTGTTTACAAGGCAATCTATCTATTTGCAAGGAAGAAGACTCTGATCAATGCATGTTTTGCAGTAGTAAGTGCTGCAGCATCATACATTGGCCCATACCTAATCACTGACTTTGTGAGTTTCCTGGCCGAGAAGGGAAGCCGGGGGTTGAATGAAGGATACCTGTTGTCACTTGGATTCTTATGCGCCAAAATGATCGAGACAATAACTCAGAGGCAATGGATTTTTGGCGCCCGACAAGCGGGTCTTCGAATTAGAGTGGCGTTGATGTCACACATATACAAGAAGGGCTTAAATCTGTCAAGTAAATCGCGGCAAAGTCACAGTGGTGGTGAGATCATAAACTATATGAGTGTAGATGTGCAGAGAATGACAGATTTCATGTATTACATAAATGTCATATGGATGCTTCCGGTGCAAGTAACCTTAGCGGTCTACATTTTGCACACGAATCTTGGTTTGGGTTCGTTGGCCGCGCTAGCCGCTACTCTGACGGTTATGGGTTTGAACATACCTCTTACAAGAATACAGAAAAGATACCAAGCTAAGATAATGGATGCTAAGGATAATAGGATGAAAGCCACATCAGAAGTCCTTAGAAACATGAAGACTCTGAAACTTCAAGCTTGGGATACTGAATTCCAGCACAGGTTAGAAGAACTGAGGGAAACAGAATCCATTTGGTTATGGAAGTCATTAAGACAAGGGGCATTTTCTGCTTTTATCTTCTGGGCATCACCCACTTTCATTTCCTTGGTAACCTTCTGGGCATGTATCTTTATGGGGGTTGAGCTAACAGCCGGAAGAGTTCTATCCGCATTCGCCACGTTTCGGATGTTGCAGGATCCTATATTTAGCTTACCTGATTTACTCAATGTCATCGCTCAAGGGAAAGTTTCAGTAGACAGAATTGCTTCTTACCTCAGGGAAGAAGAAGTTCAACATAATGCCATTGAGAATCTTCCAAGGGACCAAACAGAGTTTGACATAGTTATTGAAAAGGGAAGATTCAGCTGGGAATCTGAGCTAAGCAATCCAACCCTTGATGGAATAGATTTAAGAGTCAAAAGAGGAATGAAGGTGGCGATTTGCGGGACCGTAGGTTCCGGAAAGTCTAGCCTACTTTCTGGCATTCTGGGCGAAATGTATAAGCAATCGGGGACCGTGAAGATCAGTGGAACAAAAGCTTATGTTCCACAATCACCATGGATATTGACTGGAAATTTTAGGGACAATATTACCTTTGGGAAGGAATTCAATAGTGTTAAGTATGAGAAGACTATTGAAGCATGTGCATTGATAAAGGACTTTGAGCTATTCTCCCATGGTGACCTGACAGAAATTGGAGAAAGAGGGATCAATATGAGTGGAGGACAGAAGCAAAGGATACAAATTGCTCGTTCGGTTTATCAAGAGGCCGACATATATCTCTTCGATGACCCTTTTAGTGCCGTTGATGCTCATACCGGAAGCCACCTGTTCAAGGAGTGCCTTATGGGGGCTCTTAGAGAAAAAACTATACTTTATGTTACCCACCAAGTGGAGTTTCTTCCAGCAGCAGACCTTATTCTGGTTATGCAAAATGGAAGGATTGCACAAGCTGGAACCTTTGAACAACTTCTAAAGCAAAACATTGGATTTGAAGTTTTAGTTGGAGCTCATAGCCAAGCTCTGGAGTCAATTCTCATGGTTGAGAATTCGAGCAGAACAACTCCAAAACTGGAACCCGAAGGCGAATCAAATGTCAATTCTCAGTCAAAATCAGAACTTTCTCCCACTGAACATAACAACACAGAGCAAGGAAGTCCCCTAGAGATCAAAGAAAAAGAAGGTAAACTTATGCAAGATGAAGAAAGAGAAAGAGGAAGCATTTCAAGAGAAGTTTATTGGACCTATTTGACCACTGTCAAAAGGGGTGCCCTAGTTCCTTTAATACTTTTGGCTCAATCTTCATTCCAAGTACTTCAGGTTGCAAGTAACTATTGGATGGCTTGGGTTTGCCCTACATCAAGTGATGCTAAGCCTACATTTGACATGAATTTCATACTTCTTGTTTATATGGCACTTTCTGTTGGGAGTGCACTTTGTGTTCTCCTAAGGGCCATATTAGTGGCAAAAGCTGGACTTTGGACTGCACAGAAACTATTTATCACTATGTTGCATAGCGTACTTCTAGCACCGATGTCATTTTTCGATTCAACTCCAAATGGCAGAATTTTGAACAGGGCCTCCACAGATCAAAGTGTGCTAGACTTGGAAATGGCAACCAAATTAGGATGGTGTGCTTTCTCAATAATACAGATTCTGGGTACCATTGCAGTAATGTCACAGGTGGCATGGCAAGTATTTGGCATCTTCATTCCAGTAACCGCAGTCTGTGTGTGGTATCAAAGATATTATACACCAACAGCAAGAGAACTAGCTCGCTTGTCACAAATACAAATGGCTCCAATTCTGCATCATTTTGCAGAATCATTAGCAGGAGCAGCATCGATTCGAGCCTTCGATCAAGAAGGCCGTTTCGTGTATTCAAATCTTGAGCTTGTTGACAACTACTCAAAACCATGGTTCCATAATGTATCTGCAATGGAATGGCTTTCTTACAGATTGAATTTACTATCCAATTTTGTTTTTGCCTTCTCTCTGGTTTTGCTTGTAGTCCTCCCAGAAGGAATCATCAATCCAAGCATTGCAGGGTTGGCAGTAACTTATGGGATCAATTTGAATGTATTGCAAGCATCAGTGATATGGAACATATGTAATGCAGAAAATAAGATGATATCTGTTGAAAGAATCATTCAATACTCAAATCTCAAAAGTGAAGCAGCTCTTGTTATTGAAGATTCTAGGCCACCAAACAACTGGCCTGAAGTTGGAACAATATGTTTCAAAAACTTACAGATACGCTATGCTGAACATCTACCATCTGTTCTGAAAAACATCAATTGCACATTTCCGGGAAGGAAGAAAATCGGCGTGGTGGGACGAACCGGGAGTGGAAAATCGACCTTAATACAGGCGATATTCAGGGTTGTTGAACCTTGGGAAGGAAGGATTATAATTGATGATTTGGATATATGCAAGATTGGTCTGCATGACTTAAGGTTGAGACTTAGCATCATTCCACAGGATCCCACAATGTTTGAAGGAACAGTTAGAGGAAACTTGGACCCACTTGAGCAATACTCTGATAAGGAGGTGTGGGAGGCTTTGGATAAATGTCAGCTTGGTCAGCTGGTGAGATCAAAGCAAGAGAAATTGCAAGCCTCAGTGGTTGAGAATGGAGAAAACTGGAGTGCAGGCCAAAGGCAACTATTCTGCCTTGGAAGGGCCTTACTGAAGAAAAGTAACATACTTGTGTTAGATGAAGCAACAGCATCAGTTGATTCTGCAACTGATGGAGTTCTACAAAAGATCATCAGCCAAGAATTCAAAGATAGAACTGTTGTCACTATAGCCCATCGAATCCATACCGTTATCAATAGCGATTTGGTTTTGGTTTTGAGTGACGGGAAAATCGCGGAGTTCGATGCGCCATCGAAGTTACTCGAAAGAGAAGATTCCTTTTTTTCTAAACTCATAAGGGAGTACTCAAGAAGATCACAGAGTTTCAATAGCTTGGCCACTCAAAATGGCCAATGA 4521 0.411 MLWEDLSNMVLNASSLKLDSPCMLEHVMLPVGIGFLLIWLIQMIIKGVELIRKKKNKGTEQNTEILHPTVLKYGLAYKTSIFCCTLLLAIHIFLLLMMVKVQTQCNSKLLAFTSETVLVLAWAIALISVWKMPKVNVKFPWMIRSWWICSFFLCIINLGFHSHFRISKRIEIGFMEYADLLGLLASTLLLGISMRGRTGIVLIATDGISEPLLSEKTGKDSESSKRESLYGKSTFIQLITFSWLNPLFAVGYKKALEQSDIPDVAIEDSAEFLSSCFDESLRKVKEADGATNPSVYKAIYLFARKKTLINACFAVVSAAASYIGPYLITDFVSFLAEKGSRGLNEGYLLSLGFLCAKMIETITQRQWIFGARQAGLRIRVALMSHIYKKGLNLSSKSRQSHSGGEIINYMSVDVQRMTDFMYYINVIWMLPVQVTLAVYILHTNLGLGSLAALAATLTVMGLNIPLTRIQKRYQAKIMDAKDNRMKATSEVLRNMKTLKLQAWDTEFQHRLEELRETESIWLWKSLRQGAFSAFIFWASPTFISLVTFWACIFMGVELTAGRVLSAFATFRMLQDPIFSLPDLLNVIAQGKVSVDRIASYLREEEVQHNAIENLPRDQTEFDIVIEKGRFSWESELSNPTLDGIDLRVKRGMKVAICGTVGSGKSSLLSGILGEMYKQSGTVKISGTKAYVPQSPWILTGNFRDNITFGKEFNSVKYEKTIEACALIKDFELFSHGDLTEIGERGINMSGGQKQRIQIARSVYQEADIYLFDDPFSAVDAHTGSHLFKECLMGALREKTILYVTHQVEFLPAADLILVMQNGRIAQAGTFEQLLKQNIGFEVLVGAHSQALESILMVENSSRTTPKLEPEGESNVNSQSKSELSPTEHNNTEQGSPLEIKEKEGKLMQDEERERGSISREVYWTYLTTVKRGALVPLILLAQSSFQVLQVASNYWMAWVCPTSSDAKPTFDMNFILLVYMALSVGSALCVLLRAILVAKAGLWTAQKLFITMLHSVLLAPMSFFDSTPNGRILNRASTDQSVLDLEMATKLGWCAFSIIQILGTIAVMSQVAWQVFGIFIPVTAVCVWYQRYYTPTARELARLSQIQMAPILHHFAESLAGAASIRAFDQEGRFVYSNLELVDNYSKPWFHNVSAMEWLSYRLNLLSNFVFAFSLVLLVVLPEGIINPSIAGLAVTYGINLNVLQASVIWNICNAENKMISVERIIQYSNLKSEAALVIEDSRPPNNWPEVGTICFKNLQIRYAEHLPSVLKNINCTFPGRKKIGVVGRTGSGKSTLIQAIFRVVEPWEGRIIIDDLDICKIGLHDLRLRLSIIPQDPTMFEGTVRGNLDPLEQYSDKEVWEALDKCQLGQLVRSKQEKLQASVVENGENWSAGQRQLFCLGRALLKKSNILVLDEATASVDSATDGVLQKIISQEFKDRTVVTIAHRIHTVINSDLVLVLSDGKIAEFDAPSKLLEREDSFFSKLIREYSRRSQSFNSLATQNGQ 1506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0495 1506 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 308 589 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele41g0495 1506 Pfam ABC transporter 1271 1419 IPR003439 GO:0005524
Lele41g0495 1506 SUPERFAMILY ABC transporter transmembrane region 304 605 IPR036640 GO:0005524|GO:0016020
Lele41g0495 1506 Pfam ABC transporter 641 775 IPR003439 GO:0005524
Lele41g0495 1506 FunFam ABC transporter C family member 5 608 855 - -
Lele41g0495 1506 Coils Coil 470 490 - -
Lele41g0495 1506 CDD ABCC_MRP_domain1 623 823 - -
Lele41g0495 1506 FunFam ABC transporter C family member 3 1237 1489 - -
Lele41g0495 1506 Gene3D - 618 849 IPR027417 -
Lele41g0495 1506 Gene3D - 1236 1490 IPR027417 -
Lele41g0495 1506 ProSitePatterns ABC transporters family signature. 748 762 IPR017871 GO:0005524|GO:0016887
Lele41g0495 1506 Pfam ABC transporter transmembrane region 308 572 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele41g0495 1506 Pfam ABC transporter transmembrane region 946 1181 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele41g0495 1506 SMART AAA_5 1280 1465 IPR003593 -
Lele41g0495 1506 SMART AAA_5 650 823 IPR003593 -
Lele41g0495 1506 CDD ABC_6TM_ABCC_D2 935 1229 IPR044726 GO:0140359
Lele41g0495 1506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 617 839 IPR027417 -
Lele41g0495 1506 MobiDBLite consensus disorder prediction 861 912 - -
Lele41g0495 1506 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 623 846 IPR003439 GO:0005524
Lele41g0495 1506 FunFam ABC transporter C family member 5 898 1235 - -
Lele41g0495 1506 MobiDBLite consensus disorder prediction 861 893 - -
Lele41g0495 1506 CDD ABC_6TM_ABCC_D1 309 597 IPR044746 GO:0140359
Lele41g0495 1506 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 937 1217 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele41g0495 1506 MobiDBLite consensus disorder prediction 894 912 - -
Lele41g0495 1506 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1256 1488 IPR003439 GO:0005524
Lele41g0495 1506 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 232 1491 - -
Lele41g0495 1506 Gene3D ABC transporter type 1, transmembrane domain 283 606 IPR036640 GO:0005524|GO:0016020
Lele41g0495 1506 Gene3D ABC transporter type 1, transmembrane domain 898 1235 IPR036640 GO:0005524|GO:0016020
Lele41g0495 1506 CDD ABCC_MRP_domain2 1252 1472 - -
Lele41g0495 1506 FunFam ABC transporter C family member 10 291 605 - -
Lele41g0495 1506 SUPERFAMILY ABC transporter transmembrane region 933 1234 IPR036640 GO:0005524|GO:0016020
Lele41g0495 1506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1245 1484 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0495 Lele-ChrLele41 5022816 5033093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0495 606 865 Calmodulin-binding Proteins AT2G36910 27.599 1.04e-20 97.8