Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0444 ATGCTGGAAACCCCTCCTCCCGCACCATTACAATCGGCAGCAACGGATTCGCCTGCACCTGTCAAGCGCTATGCTCCTCCGAATCAGAGTTTTCTTGGCCAGCTTATTGTCTATGGGCTTGATCGAACAAACAGTCTTGGGAATGATTTAGAAAAGAATCAACATGCTTCAAGAAGTGTTCCAGTTACTGATCATGGAGATGCTGGTGGCAGTAATCATAAAGAGAATCACTATTTAGGACCCGTAGGATTAGAAGGATGTGGTAATAGTGTAGCTTCGAAGCTTTTGAATGATCGTTGGACAGCTGCAATGCAGTCCTACAAAAATTCTAAGGATTCATCTGGTGAGTGGATATTGTCGAACTATGATAAACCTTTTCATTCTTTGAAAATTTTACACTTTGTTGGTTTGTTTATTAATCTTTTGAAGATGATGAACTTGGACTGGACTGATCTTGTTACGTTAACTGAAGTCAGAAAAGCCAGTTATGTATTCAGGAGGGACAGCAGCTTTGTCTCAGCATTTAAGACTTCCTCATCAGATCGTGGCATCAGGACCAGCTTGGGAATATCTCACCGGCAATCCTATCCCATTTCACCGCAGGCAGAGACAATGCTGCTAGGGCAAGCTCCTCCTGTTGGCTTCAGAAACAAACCCAATTGCTTGGAATTGCAGATTCAAATCAATTCGCGTCTCTTTTCCTTTGCTCAGACTTGTTTATATGACGCCCCATGTACAAAAATGCTGCGAACAAGTGTTGGAAATGCATTTCTCGTTAGAGCTGGGCGTTCTCCCACACCCAAAGACATTCTTTCTTGGAAACCTAACACCGCCAACGATGTTTTGAGCTCGAATGTAGAGAATTCAGCAGATATAAGCATTGTAACTGAAGGCTTTGAGAGTGACTCAGTCGTTACAAATAGTGATTCTACAATAAAATCTAAGGGGAGGTTATCTGGAAGTTTTGGCAAACTGAAAGCACAAAAAGTCAAGGCCCTCATCCACAGAACTATTCACAAGAAGCAGGAAAGAAGCATTAATGATGATAACCTAGTTGTAGAACATCCAGAATTAAGAATAGAAGATGATTGGGAACAATCTGAGGGATCTAATTCTCATGTAGGATATCAGAACACTCCCAATAAATCTCGAAACAATGACAGCAGAATAGAGAGTATATTAGTTGAAAGACATTCTACCTCACTTTCAAAAGGATGGGGTGGTGGAGAAACTTCACGTACCTTTAAGACTGAATCACAAAAACTGATAAAGGAACAAAGAAAACCATTGTCTGACAGTGACTTTTTCAGTCGAAAGTCCTTCAAAGATCTACGGTACAGTGAATATATGATTGAATCTCTGGCAAAGCAATTTTATCGACGGCCTTCACATATACAAGCCATGGCATTTGAACCAGTATATACTGGAAAGAGTTGTATAATAGCTGATCAAAGTGGTTCTGGAAAGACTCTAGCATATCTTGCACCAATAATTCAGAAGCTTAGACAAGAAGAATTGGAAGGACTTGCCCATTCCTCTTCACAAGCTCCTCGAGTGGTTATATTGGCACCAACAGCTGAGTTAGCTTCTCAGGTGTTAGCTAATTGCCGATCAATGTCAAAATCTGGGGTTCCATTCAAATCTATGGTTGTAACAGGTGGCTTTCGACAGAGAACTCAACTGGAGAATTTAGAGCAGGGTGTTGATGTTTTAATAGCAACACCTGGCCGTTTTATGTTCCTCATCAAGGAAGGCTTCTTGCAGTTAACAAATTTAAGATGTGCGGTGTTGGATGAGGTAGATATACTTTTTGGTGATGAGGATTTTGAAGTGTCGCTTCAGTGCTTGATCAATTCTTCACCAGTTACCACACAATATTTATTTGTGACTGCAACTTTACCAAAATATATTTACAATAAACTAGTTGAAGTTTTTCCTGATTGTGGAGTGATCATGGGACCTGGGATGCACCGGATAAGCTCTCGACTTGAGGAGGTTCTAGTTGATTGCAGTGGAGCTGATGGGGAAGAAAAATCCCCCGATACAGCATTTCTTAATAAGAAAACAGCTCTTCTACAGATTGCAGAAGCAAGTCCTGTCGCAAAAACCATTGTCTTTTGCAACAAAATTGAAACCTGCAGAAAAGTGGAGAATGCATCGAAGCGTTTTGATAGGAAAGAAACTCGTGTACAAGTTCTACCTTTCCATGCCGCTATGACACAGGAATTACGGCTTGCTAATATGGAAAAGTTTACACGTTGTCAACCAAAGGATGTCTCCCAGTTCCTGGTTTGCACAGACAGAGCTTCGCGGGGGATTGACTTTACCGGAGTGGATCATGTCATACTTTTCGACTTTCCACGTGATCCAAGCGAATATGTGCGCCGTGTCGGAAGAACTGCAAGAGGTGCTGCTGGAAAGGGCAAGGCATACATCTTTGTGGTTGGCAAGCAAGTATCACTTGCACGTAAAATCATGGATAGAAATAGGAAGGGTCACCCTCTACATGATGTGCCTTCTGCCTATGAGCTCATGAAGTAG 2541 0.4172 MLETPPPAPLQSAATDSPAPVKRYAPPNQSFLGQLIVYGLDRTNSLGNDLEKNQHASRSVPVTDHGDAGGSNHKENHYLGPVGLEGCGNSVASKLLNDRWTAAMQSYKNSKDSSGEWILSNYDKPFHSLKILHFVGLFINLLKMMNLDWTDLVTLTEVRKASYVFRRDSSFVSAFKTSSSDRGIRTSLGISHRQSYPISPQAETMLLGQAPPVGFRNKPNCLELQIQINSRLFSFAQTCLYDAPCTKMLRTSVGNAFLVRAGRSPTPKDILSWKPNTANDVLSSNVENSADISIVTEGFESDSVVTNSDSTIKSKGRLSGSFGKLKAQKVKALIHRTIHKKQERSINDDNLVVEHPELRIEDDWEQSEGSNSHVGYQNTPNKSRNNDSRIESILVERHSTSLSKGWGGGETSRTFKTESQKLIKEQRKPLSDSDFFSRKSFKDLRYSEYMIESLAKQFYRRPSHIQAMAFEPVYTGKSCIIADQSGSGKTLAYLAPIIQKLRQEELEGLAHSSSQAPRVVILAPTAELASQVLANCRSMSKSGVPFKSMVVTGGFRQRTQLENLEQGVDVLIATPGRFMFLIKEGFLQLTNLRCAVLDEVDILFGDEDFEVSLQCLINSSPVTTQYLFVTATLPKYIYNKLVEVFPDCGVIMGPGMHRISSRLEEVLVDCSGADGEEKSPDTAFLNKKTALLQIAEASPVAKTIVFCNKIETCRKVENASKRFDRKETRVQVLPFHAAMTQELRLANMEKFTRCQPKDVSQFLVCTDRASRGIDFTGVDHVILFDFPRDPSEYVRRVGRTARGAAGKGKAYIFVVGKQVSLARKIMDRNRKGHPLHDVPSAYELMK 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0444 846 MobiDBLite consensus disorder prediction 369 387 - -
Lele41g0444 846 Gene3D - 408 648 IPR027417 -
Lele41g0444 846 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 439 467 IPR014014 GO:0003724
Lele41g0444 846 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 686 846 IPR001650 -
Lele41g0444 846 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 470 651 IPR014001 -
Lele41g0444 846 MobiDBLite consensus disorder prediction 48 76 - -
Lele41g0444 846 SMART helicmild6 717 804 IPR001650 -
Lele41g0444 846 CDD SF2_C_DEAD 687 814 - -
Lele41g0444 846 Pfam Helicase conserved C-terminal domain 689 803 IPR001650 -
Lele41g0444 846 SMART ultradead3 458 666 IPR014001 -
Lele41g0444 846 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 339 843 - -
Lele41g0444 846 Pfam DEAD/DEAH box helicase 464 636 IPR011545 GO:0003676|GO:0005524
Lele41g0444 846 MobiDBLite consensus disorder prediction 364 387 - -
Lele41g0444 846 CDD DEADc 450 639 - -
Lele41g0444 846 Gene3D - 674 837 IPR027417 -
Lele41g0444 846 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 473 815 IPR027417 -
Lele41g0444 846 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0444 Lele-ChrLele41 3977484 3989465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0444 440 825 Eukaryotic Initiation Factors Gene Family AT3G19760 27.692 9.31e-28 115