Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0407 ATGGAGAAAACTAATGTAGTCCTCATTTCTAGAGTATTAGGCTGTCTGTCATGGACAGTTGAAAGGGATATGGAAAAAGCTAGAATAGTTGGCTTGTTGACTGACAAGGGAAATGATGGAGAACAAGGATCTGTAGAAGTGAGTACAAGTATGTTAGATGAACTTGAATTTCAAGAACCATATGTGGGCATGGAATTTAATTCTGAAGAAGATGCCAGGAAATACTACGTTGAATATGCTAGACGGGTGGGATTTGTAGTACGTATCATGCAACGTCGTCGTTCAGGAATAGACGGGAGGACTCTTGCTCGTCGACTTGGATGTAACAAACAAGGCTTCTCTCCAAATAGTAAGGGCACAATTGGACCAGAGAAAAAGCCAAGGCCAAGTGTGCGAGAAGGTTGCAAGGCAACAATTTTAGTGAAGTTGGAAAAATCTGGAAAATGGGTTGTTACAAGATTTGTAAAGGATCACAACCATCCTCTAATTGTTACAGCAAATGGGTTCATCACACCGGGTGATAAAGACAAGAAAATTGAAGAACTAACTAAGGAATTAGAGCGCCAAGATCAGCTATGTGCAGCATATAGAGAAAAACTGATCCGTTTCATGAATAATGTGGAGGAGCAAACACAAGAACTGTCAGAAAAAATTCAAATCATTGTAGAAAATTTAAGGAGAGTTGAATCTGAAGTGCAAAAGAATCCCTTGAATAGAAAGTCTTGGGGTTTAACCTGA 738 0.3943 MEKTNVVLISRVLGCLSWTVERDMEKARIVGLLTDKGNDGEQGSVEVSTSMLDELEFQEPYVGMEFNSEEDARKYYVEYARRVGFVVRIMQRRRSGIDGRTLARRLGCNKQGFSPNSKGTIGPEKKPRPSVREGCKATILVKLEKSGKWVVTRFVKDHNHPLIVTANGFITPGDKDKKIEELTKELERQDQLCAAYREKLIRFMNNVEEQTQELSEKIQIIVENLRRVESEVQKNPLNRKSWGLT 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0407 245 Coils Coil 179 231 - -
Lele41g0407 245 Pfam FAR1 DNA-binding domain 74 163 IPR004330 -
Lele41g0407 245 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 38 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0407 Lele-ChrLele41 3367377 3370690 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lele41g0407 FAR1 7.4e-29 CL0274