Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0399 ATGAGTAGTCTTCTCATATCGACGACAGTTGGCACACTCTTGACGATGATTTACATACTCATATCAAACAATATATTCATATCAGGCAGTGATGTACATAATAATCTTGGTCAACATATTTATATTGGTCATGGTCAACACATTCGTGACAATCAACATATTGATATAGTCATTGATCATCATACTCATACTGGTATAAGATCACCAGTTACTAAATTACAAGAGACAGCAAAGGACTCCCTGACACGTGTCCTATGCTGTTATTGGCTGTCACAAACCATTCACTGTGACATTACTTTCTGTAGAAAAATGGCTAAGAAGATTAATTGTTTGATGATATGCTCTGTTTTATTTCACATTCTATTGAGCTCTGTTTTAACTCTATCAGCACCAGAAAATGCTCTTGTCACGCAACTTCCTGGCTTCAATGGCAAAATACCTTCCAAGCACTATGCTGGGTATGTGACAGTGGATGAAAGTCATGGAAGGAACATGTATTACTATTTTGTTGTATCAGAAAACAAACCTTCTGAAGATCCTGTGGTTCTATGGCTTAATGGTGGACCTGGCTGCTCTAGCTTTGATGGCTTCATCTATGAGCATGGCCCTTTCAATTTTGAAGCAGCAAAGACTAAGGGAAATCTTCCCACATTGCACCTCAATCCTTACAGTTGGTCAAAGGTCTCCAACGTTTTATATTTGGATTCTCCTGCTGGTGTGGGTTTTTCTTACTCCAAGAATGAATCTGATTACAGAACTGGAGACAAAAAAACTGCCTCTGATACGCATACTTTTCTCCTTAAGTGGTTTGAACTTTACCCTGAGTTCCTTCCGAACCCATTCTTTGTTTCTGGTGAGTCATATGCTGGAGTTTATGTGCCTACTCTTTCTTCTGAAATAGTGAAAGGAATTGATGCTGGTGTAAAACCCAATCTGAATTTCAAGGGTTACATGGTAGGAAATGGTGTTACAGATGAAAATTATGATGGAAATGCACTGGTTCCATTTGCTCATGGGATGGGCCTTATCTCAGATGATCTCTATGAGGAGGTTAGAGCTGAGTGCAAAGGGAATTTCTATGAACCACTCGGTCAAGAATGTGAAGACAAGCTTGCAAAAGTTGATGAGGATGTGGCTGGGTTAAACATATATGATATTCTAGAACCATGCTACCATGGCACAAATACAGAGAAAGACATGGCATCGAAGATCCGGTTACCATCGAGTTTCTTACAATTGGGTGCAACAGAGAGACCATTGCCTGTGAGAAAAAGGATGTTTGGGCGTGCTTGGCCGCTTAGAGCACCTGTGAAAGATGGAATTGTACCAACTTGGCCTCAGCTTAGCAATTCCAACAGTGTTCCATGCACGAATGATGAGGTTGCAACCGCGTGGTTGAACGATAAAACAGTTAGGAAAGCACTTCACACTGCAGAGGAAAGTGTGGTGAGTAGGTGGGATCTATGTACCGACAATATTGTATACAGTCACGATGCCGGGAGCATGATCGATTATCACAAGAACCTTACTTCCAGAGGATATAGAGCTCTCATATACAGTGGTGATCATGATCTGTGTGTTCCATACACGGGAAGTGAAGCGTGGACAAGATCGCTTGGATACAAAATTGTAGATGAATGGAGGCCTTGGACATCCAATGATCAAGTCGCCGGGTACACTCAGGGATATGAAAAGAATCTAACTTTCCTGACCATAAAGGGTGCTGGACACACTGTTCCGGAGTATAAACCAAGGGAGTCATTGGATTTCTACCAGCGCTTTTTGAAAGGTCAACCTTTTTGA 1803 0.4132 MSSLLISTTVGTLLTMIYILISNNIFISGSDVHNNLGQHIYIGHGQHIRDNQHIDIVIDHHTHTGIRSPVTKLQETAKDSLTRVLCCYWLSQTIHCDITFCRKMAKKINCLMICSVLFHILLSSVLTLSAPENALVTQLPGFNGKIPSKHYAGYVTVDESHGRNMYYYFVVSENKPSEDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAAKTKGNLPTLHLNPYSWSKVSNVLYLDSPAGVGFSYSKNESDYRTGDKKTASDTHTFLLKWFELYPEFLPNPFFVSGESYAGVYVPTLSSEIVKGIDAGVKPNLNFKGYMVGNGVTDENYDGNALVPFAHGMGLISDDLYEEVRAECKGNFYEPLGQECEDKLAKVDEDVAGLNIYDILEPCYHGTNTEKDMASKIRLPSSFLQLGATERPLPVRKRMFGRAWPLRAPVKDGIVPTWPQLSNSNSVPCTNDEVATAWLNDKTVRKALHTAEESVVSRWDLCTDNIVYSHDAGSMIDYHKNLTSRGYRALIYSGDHDLCVPYTGSEAWTRSLGYKIVDEWRPWTSNDQVAGYTQGYEKNLTFLTIKGAGHTVPEYKPRESLDFYQRFLKGQPF 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0399 600 FunFam Carboxypeptidase 455 599 - -
Lele41g0399 600 FunFam Carboxypeptidase 502 597 - -
Lele41g0399 600 FunFam Carboxypeptidase 129 413 - -
Lele41g0399 600 ProSitePatterns Serine carboxypeptidases, serine active site. 283 290 IPR018202 GO:0004185
Lele41g0399 600 Gene3D - 453 600 - -
Lele41g0399 600 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 136 584 IPR001563 GO:0004185|GO:0006508
Lele41g0399 600 SUPERFAMILY alpha/beta-Hydrolases 136 599 IPR029058 -
Lele41g0399 600 PRINTS Carboxypeptidase C serine protease (S10) family signature 269 294 IPR001563 GO:0004185|GO:0006508
Lele41g0399 600 PRINTS Carboxypeptidase C serine protease (S10) family signature 567 580 IPR001563 GO:0004185|GO:0006508
Lele41g0399 600 PRINTS Carboxypeptidase C serine protease (S10) family signature 234 244 IPR001563 GO:0004185|GO:0006508
Lele41g0399 600 PRINTS Carboxypeptidase C serine protease (S10) family signature 221 233 IPR001563 GO:0004185|GO:0006508
Lele41g0399 600 Pfam Serine carboxypeptidase 140 597 IPR001563 GO:0004185|GO:0006508
Lele41g0399 600 ProSitePatterns Serine carboxypeptidases, histidine active site. 567 584 IPR033124 GO:0004185
Lele41g0399 600 Gene3D alpha/beta hydrolase 129 432 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0399 Lele-ChrLele41 3304586 3311951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0399 461 600 Calmodulin-binding Proteins AT2G22960 51.429 1.25e-43 152