Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0373 ATGTTTATCCATTCCATTGCCTGCGGACAATCACTTTTCACCTCCACTCACTTGCGGCCAGAGTCCCATGTTTTGTTCTCTGCTTCTCGAACCTTCGTTACAGTCTTCACTGTGTTTCCTAAATTCTCGCGCCCCCAGATGGATGAGGATTTCGATATGCCGCCGTCGGAGGAGATGAACGAGGACTTCGATCTCCCCGACGATGCCGCCACTCTTAAGGTTGGAGAGGAGAAGGAGATCGGCAAGCAGGGCTTCAAGAAGAAACTTCTTAAGGAAGGCGAAGGCTGGGAGACACCTGAGGTGGGCGATGAAGTTGAAGTTCATTACACGGGAACTTTGCTTGATGGGACCAAGTTTGATTCGAGCCGCGACAGAGGAACCCCCTTTAAGTTTACTCTCGGACAAGGGCAAGTAATTAAAGGGTGGGATCAGGGTATTAAAACCATGAAGAAAGGTGAAAATGCCATTTTCACCATCCCGCCTGAACTAGCATACGGTGAATCTGGTTCTCCTCCAACGATTCCTCCTAATGCTACTCTTCAATTTGATGTTGAGCTTCTGTCTTGGACCAGTGTGAAGGACATATGCAAGGATGGTGGCATACTTAAGAAAATACTTACTGAAGGAGAGAAATGGGAAAACCCCAAAGATCCAGATGAAGTTTTAGTTAAATTTGAAGTTCGACTTGAGGATGGAACGCTTGTATCAAAATCTGATGGAGTGGAGTTTACAGTGAGAGAGGGTTACTTTTGTCCTGCCTTTGCAAAGGCTGTGAAAACCATGAAGAAGGGAGAGAAAGTGCTCTTAACTGTGATGCCGCAATATGGTTTTGGTGAGAAGGGTAAAGCAGCACACGGTGATGAAGGTGCAGTTCCACCAAATGCATCCTTGCAGATAACTCTTGAATTGGTATCTTGGAAAACTGTTTCAGAAGTAACTGACGATAAGAAGGTCATTAAGAAAATCCTCAATGAAGGGGAAGGATATGAGCGTCCAAATGAAGGAGCTGTTGTGCAAGTGAAATTGATTGGAAAACTGCAAGATGGCACTGTCTTCTTGAAGAAGGGCCACGATAAAGAGCTGTTTGAATTCAAAACAGATGAAGAGCAAGTCATCGATGGACTTGATAGAGCAGTGTTGACCATGAAAAAGGGTGAAGTAGCATTGTTGACTGTTGCACCTGAGTATGCCTTTGGTTCATCCGATTCCAAGCAAGAATTGGCTGTTGTTCCCCCCAACTCAACTGTTTACTATGAAGTTGAACTAGTATCATTTGTGAAGGAGAAGGAGTCCTGGGATATGAACACACAGGAGAAAATCGAAGGTGCTGGTAAGAAGAAAGAAGAAGGAAATGCGTTGTTTAAGAGTGGAAAATATGCTAAAGCCTCTAAAAGATATGAGAAGGCTGTCAAGTACATAGAGTATGATTCCTCCTTCAGTGAAGAAGAGAAGAAGCAGGCCAAGGCACTGAAGGTTGCTTGCAATCTGAACAATGCGGCTTGCAAATTGAAGTTAAAAAATTATAAAGAAGCTGAGAGATTGTGTACTAAGGTTCTGGATCTTGAAAGCACAAACGTAAAGGCACTTTATAGAAGAGCACAGGCATATATCGAGTTGGCTGATTTGGATTTGGCGGAATTTGATATTAAGAAAGCTCTTGAGATAGATCCTAACAACAGGGATGTGAAGTTGGAGTACAGGACTTTGAAGGAAAAGGTGAAGGAGTTTAACAGAAAGGAGGCTCAATTTTATGGGAATATGTTTGCCAAGATGACTAAGCCGGATTCAAATGACAATAACAAAGCAGCGAGCAAGGATGCTGAACCCATGAGCATTGACAGCCAAGCATAA 1851 0.4354 MFIHSIACGQSLFTSTHLRPESHVLFSASRTFVTVFTVFPKFSRPQMDEDFDMPPSEEMNEDFDLPDDAATLKVGEEKEIGKQGFKKKLLKEGEGWETPEVGDEVEVHYTGTLLDGTKFDSSRDRGTPFKFTLGQGQVIKGWDQGIKTMKKGENAIFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGILKKILTEGEKWENPKDPDEVLVKFEVRLEDGTLVSKSDGVEFTVREGYFCPAFAKAVKTMKKGEKVLLTVMPQYGFGEKGKAAHGDEGAVPPNASLQITLELVSWKTVSEVTDDKKVIKKILNEGEGYERPNEGAVVQVKLIGKLQDGTVFLKKGHDKELFEFKTDEEQVIDGLDRAVLTMKKGEVALLTVAPEYAFGSSDSKQELAVVPPNSTVYYEVELVSFVKEKESWDMNTQEKIEGAGKKKEEGNALFKSGKYAKASKRYEKAVKYIEYDSSFSEEEKKQAKALKVACNLNNAACKLKLKNYKEAERLCTKVLDLESTNVKALYRRAQAYIELADLDLAEFDIKKALEIDPNNRDVKLEYRTLKEKVKEFNRKEAQFYGNMFAKMTKPDSNDNNKAASKDAEPMSIDSQA 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0373 616 SUPERFAMILY FKBP-like 311 444 - -
Lele41g0373 616 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 335 426 IPR001179 GO:0003755
Lele41g0373 616 FunFam Peptidylprolyl isomerase 431 586 - -
Lele41g0373 616 Gene3D - 77 192 IPR046357 GO:0003755
Lele41g0373 616 FunFam Peptidylprolyl isomerase 194 307 - -
Lele41g0373 616 MobiDBLite consensus disorder prediction 590 616 - -
Lele41g0373 616 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 218 307 IPR001179 GO:0003755
Lele41g0373 616 Coils Coil 559 579 - -
Lele41g0373 616 SUPERFAMILY FKBP-like 194 310 - -
Lele41g0373 616 PANTHER PEPTIDYLPROLYL ISOMERASE 56 191 - -
Lele41g0373 616 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 329 423 IPR001179 GO:0003755
Lele41g0373 616 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 97 187 IPR001179 GO:0003755
Lele41g0373 616 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 213 303 IPR001179 GO:0003755
Lele41g0373 616 Gene3D - 193 307 IPR046357 GO:0003755
Lele41g0373 616 SUPERFAMILY TPR-like 431 591 IPR011990 GO:0005515
Lele41g0373 616 Gene3D - 308 428 IPR046357 GO:0003755
Lele41g0373 616 FunFam Peptidylprolyl isomerase 308 428 - -
Lele41g0373 616 ProSiteProfiles TPR repeat profile. 526 559 IPR019734 GO:0005515
Lele41g0373 616 Pfam Tetratricopeptide repeat 526 559 IPR001440 GO:0005515
Lele41g0373 616 FunFam Peptidylprolyl isomerase 75 193 - -
Lele41g0373 616 Gene3D Tetratricopeptide repeat domain 429 586 IPR011990 GO:0005515
Lele41g0373 616 SMART tpr_5 492 525 IPR019734 GO:0005515
Lele41g0373 616 SMART tpr_5 526 559 IPR019734 GO:0005515
Lele41g0373 616 SMART tpr_5 443 476 IPR019734 GO:0005515
Lele41g0373 616 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 102 190 IPR001179 GO:0003755
Lele41g0373 616 SUPERFAMILY FKBP-like 79 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0373 Lele-ChrLele41 3019595 3027000 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0373 47 591 Calmodulin-binding Proteins AT3G25230 81.239 0.0 891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0373 41 3019595 3027000 Lele43g1002 43 18555317 18569855 hybridization