Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0372 ATGAGTTGCATTCTTATGGGGCTCTTGGAGTCAAGCTGCGCCCAAACCCGGCACCAACCAGGGAAGAAGCACTTTACTCTCACTCCTCCAACCGTCTCGGTTTCGACGTCTTCGACTGGTAAGATATCCCTTATCTCCACTCCAGTTTTGGCGGTCAATTCTGAGGTCGGTGAGGAATTCGGCGACCATTCCTTCGAAGGTTCTGTTGCCGAAACCTTGGGCTTGATTTCGGTTCTGCATTTGCTGAGAAATTCTTTGAAGGAGTTGCAACAAATTTTGCTTCTTGCTGTTGTTGTTTTCTCTGAATTTCATGGAGATGCAGAGATGAGTTATTGGTCACCAGCATATGTTTTTACTAATCAACTTATACCATTGTCTGCTGCAAGCACCAAATCTTACGTTGATATCAAAAGCAGCACCAGTTTTATATGTAGTCCAAGCCGAGGAAGGTGCTATTTCTCTGTTGCTGAGAACCATTATAAAGTCAGGAGACTCAGGATTTCTGGGGTAATTAAAGCTAGACAAGGATTGACACAGTTTCAGCCTCAACAAGGAACTTGGGAAGAACCTGATGATGGCAGCGATAGTGAGTATGATGAAGAAGAAGATGAGGAAACGGAAGATGAAAACTATGGCTTCGAAAGTGATTGGGAAGAGGAAGAGATAACGTCATCAGCTGTTAATAGTGTTATTTCAGTGGACAAGTATGGGGAGGATACTAAAAAAGAGGTTGAACAGCTTCTGGATCCTGAAGAAAGAGCAGTCTTGCAACAGAATGTGACTCCAAACTTGGAAAAAATTTCAACTGAAAAATGGAGCCCACTCCACACTTTAGCGCTATCAACACAGATAAGATGTATGGATCAGCTGCTTGAAAGTGGTGTTGATATTGATCTTAAGAACAAGGAAGGTCTAACGGCACTTCATATAGCTATCATAGGAAAGAAAGAAGCTGTAATAAGCCATCTTTTACGGAAAGGTGCAAGTCCTCATGTCAAGGATAAGGATGGTGCTACCCCACTTCATTATGCAGTTCAAGTTGGTGCCAAGCAAACTGTGAAGTTATTGATCAAATATAAGGTTGACGTCAACGTTGCAGATAAGGAAGGTTGGACCCCATTGCACGTTGCTATTCAAGGCAGAAATAGAGAAATTGCAAAAATTTTATTACTAAATGGTGCTGACAAGACAAGAAGAAATAAGGATGGGAAAACAGCATTGGATCTAAGTTTATGTTATGGGAAGGACTTCAAGTCTTATGACCTTGGCAAATTGTTGAAGGTAGTTCCAGCTGACTCCGAATTTTGA 1308 0.419 MSCILMGLLESSCAQTRHQPGKKHFTLTPPTVSVSTSSTGKISLISTPVLAVNSEVGEEFGDHSFEGSVAETLGLISVLHLLRNSLKELQQILLLAVVVFSEFHGDAEMSYWSPAYVFTNQLIPLSAASTKSYVDIKSSTSFICSPSRGRCYFSVAENHYKVRRLRISGVIKARQGLTQFQPQQGTWEEPDDGSDSEYDEEEDEETEDENYGFESDWEEEEITSSAVNSVISVDKYGEDTKKEVEQLLDPEERAVLQQNVTPNLEKISTEKWSPLHTLALSTQIRCMDQLLESGVDIDLKNKEGLTALHIAIIGKKEAVISHLLRKGASPHVKDKDGATPLHYAVQVGAKQTVKLLIKYKVDVNVADKEGWTPLHVAIQGRNREIAKILLLNGADKTRRNKDGKTALDLSLCYGKDFKSYDLGKLLKVVPADSEF 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0372 435 MobiDBLite consensus disorder prediction 181 217 - -
Lele41g0372 435 ProSiteProfiles Ankyrin repeat region circular profile. 369 395 - -
Lele41g0372 435 ProSiteProfiles Ankyrin repeat profile. 303 335 IPR002110 GO:0005515
Lele41g0372 435 ProSiteProfiles Ankyrin repeat profile. 336 368 IPR002110 GO:0005515
Lele41g0372 435 MobiDBLite consensus disorder prediction 190 217 - -
Lele41g0372 435 ProSiteProfiles Ankyrin repeat region circular profile. 303 335 - -
Lele41g0372 435 SUPERFAMILY Ankyrin repeat 262 414 IPR036770 -
Lele41g0372 435 ProSiteProfiles Ankyrin repeat region circular profile. 336 368 - -
Lele41g0372 435 ProSiteProfiles Ankyrin repeat profile. 270 302 IPR002110 GO:0005515
Lele41g0372 435 SMART ANK_2a 270 299 IPR002110 GO:0005515
Lele41g0372 435 SMART ANK_2a 303 332 IPR002110 GO:0005515
Lele41g0372 435 SMART ANK_2a 336 365 IPR002110 GO:0005515
Lele41g0372 435 SMART ANK_2a 369 398 IPR002110 GO:0005515
Lele41g0372 435 Gene3D - 338 416 IPR036770 -
Lele41g0372 435 Pfam Ankyrin repeats (3 copies) 318 400 IPR002110 GO:0005515
Lele41g0372 435 Gene3D - 233 337 IPR036770 -
Lele41g0372 435 ProSiteProfiles Ankyrin repeat profile. 369 401 IPR002110 GO:0005515
Lele41g0372 435 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 227 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0372 Lele-ChrLele41 3015693 3019198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0372 255 395 Ion Channels AT2G25600 31.915 2.05e-09 57.8