Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0366 ATGGGAGCTGCCCGCAAGCTGAGATCCCACCGCAGGAGGCAAAGGTGGGCAGACAAGGCATACAAAAAGTCTCACCTTGGGAATGAGTGGAAGAAGCCTTTTGCTGGCTCATCCCATGCAAAGGGTATTGTGCTTCAAAAGATAGGGATTGAGGCTAAGCAGCCCAACTCTGCCATTCGTAAGGGTGCCAAGGTTCAACTCATTAAAAATGGGAAGAAGATCGCCGCATTTGTTCCCAACCACGTTTGCTTAAACTATATAGAAGAGAATGATGAAGTATTGATAGCTGGATTTGGGCGAAAAGGTCACGCTGTCGGTGATATTCCTGGGGTCAGGTTCAAGGTTGTGAAGGTGGCGTTGGCACTCTGTTCTTCCAAAATTGAGCAGAGTGCAATGATATCAGAATCATCGCCGAATTAG 420 0.4762 MGAARKLRSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLQKIGIEAKQPNSAIRKGAKVQLIKNGKKIAAFVPNHVCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVALALCSSKIEQSAMISESSPN 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0366 139 MobiDBLite consensus disorder prediction 1 19 - -
Lele41g0366 139 Gene3D - 19 131 IPR012340 -
Lele41g0366 139 FunFam 40S ribosomal protein S23 19 132 - -
Lele41g0366 139 ProSitePatterns Ribosomal protein S12 signature. 53 60 IPR006032 GO:0003735|GO:0005840|GO:0006412
Lele41g0366 139 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 1 130 IPR006032 GO:0003735|GO:0005840|GO:0006412
Lele41g0366 139 Pfam Ribosomal protein S12/S23 25 120 IPR006032 GO:0003735|GO:0005840|GO:0006412
Lele41g0366 139 MobiDBLite consensus disorder prediction 1 22 - -
Lele41g0366 139 TIGRFAM uS12_E_A: ribosomal protein uS12 3 119 IPR005680 GO:0003735|GO:0006412|GO:0015935
Lele41g0366 139 PIRSF RPS12p_RPS12a_RPS23e_RPS12o 10 135 IPR006032 GO:0003735|GO:0005840|GO:0006412
Lele41g0366 139 SUPERFAMILY Nucleic acid-binding proteins 14 119 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0366 Lele-ChrLele41 2975655 2977357 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0366 1 129 Cytoplasmic Ribosomal Protein Gene Family AT5G02960 83.459 6.71e-74 215