Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0350 ATGGTAAGCTTGAGAAGGCGCAGACTTTTGGGGCTATGCTCAGGAAACAGTTCCTTTGTTACTCCACTTCCGCTATATTGTGAGAACCTCAATGCTTCTCAAGATTCAGTTCAGCGTGCTAAACCTAAGATCGCCCAATCTGACGATGGAATTGAAAGCATCCTTCATAGTGTAGGAACTCAACTACTAAAACAGAATCCCATTCTGAAGGTGAAAGAAGAACCAGCTTCCTCAAATGTATCTGGTTCTAGCTCGTCAAAGGAGCAGTCTTGTCAGCAGTTTATTGGGCCTCCTATCAAGCGCAGAAAGCCGCATAGGAGAAAGCATATGCATAGTCAAGAATCATGTGTAATGAGAGGTGTCTATTTTAAGAATATGAAGTGGCAGGCAGCGATTAAAGTGGACAAGAAACAGATCCATCTCGGAACCGTTAATTCTCAAGAAGAGGCCGCTCGCCTATATGACAGGGCTGCTTTCATGTGCGGGCGGGAGCCCAACTTCGAGCTTTCAGAAAAAGAGAAACAAGAACTAAGTAAATTGCAATGGAATGATTTCTTGGCATTTACCAGACAATCAATTACCAGTAAAAAACACAGAAGAAGACTTGGCTCCAGGCAGCGCGAGTCCGAGCCGCCTACATTTCATGACGGGGACAACCAGCAAGGCATTGATGCCACCTCAGCTTCTGAAGATGCTGATCTCGAAACATCGGACTCGTGA 720 0.4528 MVSLRRRRLLGLCSGNSSFVTPLPLYCENLNASQDSVQRAKPKIAQSDDGIESILHSVGTQLLKQNPILKVKEEPASSNVSGSSSSKEQSCQQFIGPPIKRRKPHRRKHMHSQESCVMRGVYFKNMKWQAAIKVDKKQIHLGTVNSQEEAARLYDRAAFMCGREPNFELSEKEKQELSKLQWNDFLAFTRQSITSKKHRRRLGSRQRESEPPTFHDGDNQQGIDATSASEDADLETSDS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0350 239 MobiDBLite consensus disorder prediction 215 230 - -
Lele41g0350 239 MobiDBLite consensus disorder prediction 73 112 - -
Lele41g0350 239 MobiDBLite consensus disorder prediction 196 239 - -
Lele41g0350 239 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 105 210 - -
Lele41g0350 239 SUPERFAMILY DNA-binding domain 117 162 IPR016177 GO:0003677
Lele41g0350 239 SMART rav1_2 119 174 IPR001471 GO:0003700|GO:0006355
Lele41g0350 239 ProSiteProfiles AP2/ERF domain profile. 93 172 IPR001471 GO:0003700|GO:0006355
Lele41g0350 239 MobiDBLite consensus disorder prediction 76 93 - -
Lele41g0350 239 FunFam ethylene-responsive transcription factor-like protein At4g13040 118 169 - -
Lele41g0350 239 Gene3D AP2/ERF domain 118 169 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0350 Lele-ChrLele41 2829631 2833800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0350 43 191 AP2-EREBP Transcription Factor Family AT1G51190 24.699 3.82e-06 45.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele41g0350 AP2 8.7e-05 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0350 41 2829631 2833800 Lele43g1020 43 18773045 18777150 hybridization
Lele41g0350 41 2829631 2833800 Lele44g1001 44 18775519 18781636 hybridization