Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0339 ATGACCTCCAAGAAGATCAATAGTTTCCAAAAGTTCAAAAGATTCGTTCGTGCGAGAGCATTCGTTACATTTCGTGATTCGGAGCTCCGATTGAAGTTTTATTCTCAATTTCTGGACATCGGTGCTGAAAACAGTGCTTTTCTTGTCCAAATTTATTATCTTTTTGTTATTGCTGTTGACTTTGATTCGTCTCAAAGAAGATGTATTCTTGAATTGATGAAATGGGTTGGTTGGGTTCATTGGGTACTATTTCTGAAGGCTTGGTTATGGGTCTCTTGTGACCAATGGCTTTTGCATTCAGTGGTAAATGTAAGGTTGTGTGATTTGGGGGCATTAATATCAGTACTCAAGATGAGTAGTCGTTCTGTTAGGGAACGTGCTTTCCGAAGTTACCGGCGAAGGAAGGCTGTTATGGATTTGGATCTTAATAGAGCTCCACCTGGTGAGAATCGGGAGCAAGAGGGACCTTCGATTCCACCGGAACCTCAGTTTGTTCAAGCTGTCCAGCAACTACAAGATGTACAGCCTATTGATGTGGAGGCCATTGATGATGATGTCATTGAATGTACAGCAAGTGCTTTTGCTGAAGCTAAAAACAATTCAAGAAGGAATCGTGGGAGGACTGTAGTTGATGTGGATATAGATTATCAGAGGTGGATAACTGAAAATACTACCAACAATGGCAGAAGAGATTCTTCAAACCAAACAATTCTTAATTCTGATCTGTGTATAAACTTGGTAGGCAGTGGCAGTTCTGAGTGGGAGAACGATAAAAAGTCACAGAAACCTCCAGTGGAGCCTGTCTTTAGCTGTCCAATATGCATGGGCCCATTTATAGAAGAAGTGTCAACCAGGTGTGGTCATATATTCTGTAAGAGTTGCATCAAGGCTGCTATAAGTGCACAGGGTAAATGCCCTACTTGTAGGAAAAAGGTTACTGCAAGAGAGCTCATTAGGGTGTTTCTACCATCAACTAGTTGA 981 0.4139 MTSKKINSFQKFKRFVRARAFVTFRDSELRLKFYSQFLDIGAENSAFLVQIYYLFVIAVDFDSSQRRCILELMKWVGWVHWVLFLKAWLWVSCDQWLLHSVVNVRLCDLGALISVLKMSSRSVRERAFRSYRRRKAVMDLDLNRAPPGENREQEGPSIPPEPQFVQAVQQLQDVQPIDVEAIDDDVIECTASAFAEAKNNSRRNRGRTVVDVDIDYQRWITENTTNNGRRDSSNQTILNSDLCINLVGSGSSEWENDKKSQKPPVEPVFSCPICMGPFIEEVSTRCGHIFCKSCIKAAISAQGKCPTCRKKVTARELIRVFLPSTS 326
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0339 326 PANTHER ELFLESS, ISOFORM B 118 326 - -
Lele41g0339 326 SMART ring_2 271 308 IPR001841 -
Lele41g0339 326 ProSitePatterns Zinc finger RING-type signature. 286 295 IPR017907 -
Lele41g0339 326 ProSiteProfiles Zinc finger RING-type profile. 271 309 IPR001841 -
Lele41g0339 326 SUPERFAMILY RING/U-box 264 321 - -
Lele41g0339 326 Pfam Zinc finger, C3HC4 type (RING finger) 271 308 - -
Lele41g0339 326 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 216 325 IPR013083 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele41g0339 Lele-ChrLele41 2759741 2763094 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0339 126 325 C3H Transcription Factor Family AT5G48655 50.495 4.95e-47 156