Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0338 ATGGTGAGAGAGCAGAGGGTAGAGTCCTTCTACACCAGACTCCGCGAGTCGGCAATTGCTTCGCCTTCTTCGCCCTTACTCATATTCCCGTCAACGTCTGACGTGGACTCACTCTGCGCATTGAAAATCATCTTCCACGTTATCGAATCTGATTCGGTCCGATATGCATGTTATCCAGTGTCCTCGTTTCAGGAGATTCACAAATACGCAGGACCCAGTTTAAATTCATCTGACGAGCCCGTTTCGATCCTGTTGATAAATTGGGGGTGCCATAGGGACTTGAGGAGGATTCTGAATCTGGGTCCTTCTGCACGTATTTTCGTGGTTGATAGTCACCGTCCAATTCATCTTCACAATTTGAGCGATGATAATGATCGGGTGGTCGTGCTATATACACGAGATGATGAACAGCAGGCTGATTTGGCCTATGATTTTGATGTGTCGGCTTTGTCTAATGCCACTGACTTAAATAGTGACGACGGGGAGGCTGAAGAGGAATCTGACAGTGATAACGACAATGACAGTGAAAGTGAAGACGAGGGAAATAGGGATGGATCCAGGAAGCGAAGGCGAGTTTCTCCGGATAATGAACAAGACCCGATTCAGCTTTTCCGAAAGTTGAAAAAGGAATATTATCATATGGGTACATTTCACGGGAAGCCATCTGGTTGCTTGATGTATGAACTATGCCATTTTCTGCGGAAGAACACAAATGAACTGCTGTGGCTCGCGTGTGTATCTTTAACGGATCAGTTTATTCATGAGAGGCTAAGTGACGAACGGTACAAAGATGGGGTTATGGAGCTAGAGCAGCACATCAACAGTTCGGGGAATTTGGACGCAGTAACTTGTGTAACGCTGAAAGATGGGACAAAGATCCGGGCGCCTAATGCAACTAGAATCACATACGAAGAGGAGCCAAGGCTTATGTTGCTAAAAGAGTGGAATCTGTTTGATTCAATGTTGTGTTCTTCGTACATTGCGACTAAGTTGAAGACGTGGAGCGACAATGGGATGAAAAAGCTGAATCTTCTGCTAGCCCGGATGGGGTTTGCTCTTGCTGATTGCCAACAGAAGTTTCAATACATGAACTTAGAAGTCAAACGCAAAATGAAAGATGAATTTGAGCGATTTCTACCTGAGTATGGTTTGACTGATTTCTATTATCGGAGTTTCTTAAGAATACATGGTTATAATTCAAGGGTGTCTGCGGCAGATGTGGTATATGGTGTGACTGCTCTGCTTGAGTCATTTGTGAAATCAGATGGCTCATGTGCTTCCAAGCTATTTGGTGTAGCTTATGATGCACTGTCCCTGAGCAATGTTGATAAGCTAAAATCTGGAATGCAGCATGCAATCAAGATTCAAAGGGCCATTCTAAGACAAGGAAGCACAGCGATAACCAAGAGTGGCTGTATAAGAAGTGGGAGGAAATTCAGATGGGTAAAACTTGAAGATTCTGCTGACACAAAGTTACTGGGTTATCCCCAAGCTTTGACTAAATTCTGTTATTTTCTTATGGATGCTTTGCGAGAGAAAGGAGCAAGAATGAAGCCTCTGCTTTGTGCTTGCTTATCTCAAGAGCCCAGTAAAATGTTGATCGTAGGTGTTTGTGGGAAGCCTCGTCTCGGTGCAGGTAAAGGAAATGCATTTGGAATTGCATTTAGAAATGTTGCTGAGGAAATTGGAGCAGACTTCTTTCATGAATTGTTCGAATCTTCATGGATTGTTTTAAATGCATCAGCAGTCAATTCCTTCATGGTTAGGTTGACTGAGAGGCTATGA 1785 0.4375 MVREQRVESFYTRLRESAIASPSSPLLIFPSTSDVDSLCALKIIFHVIESDSVRYACYPVSSFQEIHKYAGPSLNSSDEPVSILLINWGCHRDLRRILNLGPSARIFVVDSHRPIHLHNLSDDNDRVVVLYTRDDEQQADLAYDFDVSALSNATDLNSDDGEAEEESDSDNDNDSESEDEGNRDGSRKRRRVSPDNEQDPIQLFRKLKKEYYHMGTFHGKPSGCLMYELCHFLRKNTNELLWLACVSLTDQFIHERLSDERYKDGVMELEQHINSSGNLDAVTCVTLKDGTKIRAPNATRITYEEEPRLMLLKEWNLFDSMLCSSYIATKLKTWSDNGMKKLNLLLARMGFALADCQQKFQYMNLEVKRKMKDEFERFLPEYGLTDFYYRSFLRIHGYNSRVSAADVVYGVTALLESFVKSDGSCASKLFGVAYDALSLSNVDKLKSGMQHAIKIQRAILRQGSTAITKSGCIRSGRKFRWVKLEDSADTKLLGYPQALTKFCYFLMDALREKGARMKPLLCACLSQEPSKMLIVGVCGKPRLGAGKGNAFGIAFRNVAEEIGADFFHELFESSWIVLNASAVNSFMVRLTERL 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0338 594 Pfam CDC45-like protein 424 592 IPR003874 GO:0006270
Lele41g0338 594 Pfam CDC45-like protein 27 418 IPR003874 GO:0006270
Lele41g0338 594 MobiDBLite consensus disorder prediction 180 199 - -
Lele41g0338 594 MobiDBLite consensus disorder prediction 158 179 - -
Lele41g0338 594 MobiDBLite consensus disorder prediction 152 199 - -
Lele41g0338 594 PANTHER CDC45-RELATED PROTEIN 1 593 IPR003874 GO:0006270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0338 Lele-ChrLele41 2752891 2754675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0338 1 594 Core DNA Replication Machinery Family AT3G25100 73.877 0.0 908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0338 41 2752891 2754675 Lele43g1033 43 18869520 18871304 hybridization
Lele41g0338 41 2752891 2754675 Lele44g1014 44 18868007 18869791 hybridization