Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0335 ATGTGTTCATTGGGAGCAACGCTGACATTGTCAGCACAAACCTACCTTCCTAACTGTTCTGCTTCCGCAATACCAATGGATGAGATCATGAGCATCATAAACTCCATGTTCAGGAAGTTAACATTTCTAAGTTTTGCTGATACTAGTGACTCCGTTTCAGGCTTTATTGATGATCTCAAAGCTGCCCTACAAGGACGAGATATCTTCACTTTTAGTTCAGATAGAAGCATAATGGCGGAGACAGCGGAGTCAGTTCAATCGTCAAACAACTTTAAGGTACAAAGACATGCTCACATACGCCATAATGTAGACCATGATGATGAGGAATTCATTCATTGTGTTTTAAAATATGCCAATGGTCTTCCATTGGCCATTCAATCATTAGGCTGTTCCTTGAGGGGTCGAAATCCTTTGGAACGGAGAAGTTTCTTGGAAGAACTGAAAGAACATCCCGACAGCAATATTATGGATCCCCTTGTACGAAGTCTTTATGAAAACAAAGGTTTTGAGTTGGAGATGTTTTTCTATGTTGCTTGTTTCTTCAATGGGAAAGATAAGAGCGATGTCATCAGAATCTTAGATTCTCTCAATTTCTGTGATAATAAGCTTGGAATCTTAATGCTCCAGGACAAATCACTCATAAGCATAAGGAATGGGAAAATTTGGATGCACAATTTGCTGGAACAAGTAGGAAGGGAAATTGCTGAACGATTGTCACTCTTCTCTGAATTTCAGTATGTGGATTTGGAATTGCTGGAACAAGCCCTTCATCCTAACCATTATGCTTCAACAATACGGATGGATTACAAGGGTATCCAAAGCGACAAGGACTGGAAGTACAAAGACCAAGATTATGAGAGATTCACCCTTGTTGTTTTAGATCATGCTAATGGCCTTCCGTTGGCCATTAAATCATCAGGTTCAGCGTTGTTCGGTCGAAGTCATTCAGAATGGGAAAGTTATGTTGAAAAATTGCAACAACAGCCGGCCAATAAGAACATTATGCTTCTCCTTAAATCAAGTTTTGATGAACTCAGTTGGAATTCGAAAGAGCTATTTTTAGATATAGCTTGTTTCTTCAATTGCGAAGATGAGAGCCATGTCATGAGAATTTTAGATTCTTACCGTTTCTTTCGTAAGGAAGAAATCAAAGGAAGCGGAAGAGTGAACGCCATAGTCTTGGATCTGGAAGCTTTTGAAGAGACTCTACTGAATTTTGAAGCTTTATCAAAGATGAAAAACCTTGGATTACTAATAATTCGTAATGTGAATTTTGTTGGACAACCCTGCCCTCTTCCTTGGAGGTTGAAATATGTTTCTTGGCATCAATATCCTTTCACTTATTTCCCATTAAGTATTGAAAAGCCTCTACTTGTTGATTTGATCATGCCTCATAGTAGCATCACACAGCTATGGCAAGGCTTAAAGACTGTTCCTAAGTCGAGGAACTTAGATCTTAATGGCTCTGAATGCTTGGAGGAGACGCCAAATTTTGAAGGGTTGCCAAATCTTGAAAGTTTAGACCTTGAAGGATGCAGTAAGATACAGCAAATTGATTCATCTATTGAAACTCTTCAAAAGCTCAAATTCATGAATTTGAGAAACTGCATCAATCTGGTTAGCATCCCAAATAGCTTATTTGATGTAAGTTCTCTTGAGATGATAAATCTTGCTGGCTGCTCAGGTTTTGAGAAAGTTTTGAACTTTGATTCTGTCGAGAGATCTTTAGAACTGGAGCTTGGATCACAAGCAAGCCTCTCTACTTCTCAGGGTACACTAAGCGACGAAAACAACTCTAGTGAGATTGCACAATTAAAACAAGAAATGCATGAGCAGAAGAAGTGTCATGAGGCAACCCTTGAGAAGGTTGTTGCTACAATGCTAGCTAGAGAAGAGGAATTTAGAGCCCGAGAGCAAAAGATGGATCAAATGATGGCTCTAATGAGTAACTATTTTAAGGAAAGTAACAATGAGGTTGCTAGTTCTTCGCAGCTTGCACGTAATGATGATGAAGTTTCTCAAAATAAGAATGAGTAA 2037 0.3893 MCSLGATLTLSAQTYLPNCSASAIPMDEIMSIINSMFRKLTFLSFADTSDSVSGFIDDLKAALQGRDIFTFSSDRSIMAETAESVQSSNNFKVQRHAHIRHNVDHDDEEFIHCVLKYANGLPLAIQSLGCSLRGRNPLERRSFLEELKEHPDSNIMDPLVRSLYENKGFELEMFFYVACFFNGKDKSDVIRILDSLNFCDNKLGILMLQDKSLISIRNGKIWMHNLLEQVGREIAERLSLFSEFQYVDLELLEQALHPNHYASTIRMDYKGIQSDKDWKYKDQDYERFTLVVLDHANGLPLAIKSSGSALFGRSHSEWESYVEKLQQQPANKNIMLLLKSSFDELSWNSKELFLDIACFFNCEDESHVMRILDSYRFFRKEEIKGSGRVNAIVLDLEAFEETLLNFEALSKMKNLGLLIIRNVNFVGQPCPLPWRLKYVSWHQYPFTYFPLSIEKPLLVDLIMPHSSITQLWQGLKTVPKSRNLDLNGSECLEETPNFEGLPNLESLDLEGCSKIQQIDSSIETLQKLKFMNLRNCINLVSIPNSLFDVSSLEMINLAGCSGFEKVLNFDSVERSLELELGSQASLSTSQGTLSDENNSSEIAQLKQEMHEQKKCHEATLEKVVATMLAREEEFRAREQKMDQMMALMSNYFKESNNEVASSSQLARNDDEVSQNKNE 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0335 678 Gene3D Ribonuclease Inhibitor 388 578 IPR032675 -
Lele41g0335 678 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 356 IPR027417 -
Lele41g0335 678 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 94 164 IPR027417 -
Lele41g0335 678 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 30 236 IPR044974 GO:0006952
Lele41g0335 678 Gene3D - 86 166 IPR042197 -
Lele41g0335 678 Gene3D - 274 346 IPR042197 -
Lele41g0335 678 SUPERFAMILY L domain-like 390 564 - -
Lele41g0335 678 PRINTS Disease resistance protein signature 499 515 - -
Lele41g0335 678 PRINTS Disease resistance protein signature 296 310 - -
Lele41g0335 678 MobiDBLite consensus disorder prediction 657 678 - -
Lele41g0335 678 Pfam Leucine Rich Repeat 458 474 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0335 Lele-ChrLele41 2727539 2733600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0335 285 582 WRKY Transcription Factor Family AT4G12020 26.133 3.53e-19 90.9