Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0332 ATGCCTCCTTCGCTTCCTTTGATGAGAGGACTTACACATTTAGATATATCTCGAAACAACCTATCAGGAACAATACTAATTGGCCTACAGAACAATTCTTTTCTTCAATATTTGAATGTTTCTTTCAATATGTTTCATGGTGAGGTGCCTATAGAAGGGGTTTTCAGCAATACAAGTGCAATATCAGTGACTGGAAATGTCAATCTTTGTGGAGGTATTTCTGAGTTGCACTTACCACCATGCCCAAAGAAAGTTGACAGGAAGAGAAAACACAATTTGAAGATCATGGTTTTTGTGATTTGTGTGGCTTTTTCCCTTTTATTGATATCTTTGTTTGCTTTCTATTGGAGACGTGAAAGAAACAAGAAATCATCTTCAACTTCATCCAGAGTCGAACAATTTCCTAAGGTGACATATCAAAATCTACACATTGCAACTGAAGGTTTCTCTACCAACAACTTGATTGGGTCTGGGAGTTCTGGCTCAGTATATAAAGGAATGCTAGAATCAGAAGATAAAGCTGTTGCAATAAAGGTATTGGACCTTCAAAAGAAGGGCGCTGAAAAGAGTTTCATTTCAGAATGTAATGCCTTGAAAAACATTAGGCACCGAAATTTGGTAAAAATTTTGACATGTTGCTCGAGCATGGATTACAAGGGGCAAGAATTTAAGGCATTGGTATTTGAGTACATGTCTAATGGAAGCCTTGAAAAATGGTTGCATCCTAATCAAGACTGTGCGTATTGGTCAACATTGGATATTTTTCAAAGATTAAATGTTATATATGATGTCGCCTCTGCACTGCATTATCTTCATTATGAAAATGAGCAACCAGTTGTCCATTGTGACTTAAAGCCTAGCAATGTCCTTCTTGACGACGATATGGTAGCTCATGTGAGTGATTTTGGGTTAGCAAGACTACTTGCCACCATTAATGGAAGTTCTCAAGACCAGGCAAGCACATCTAGAATAAAAGGCACAATTGGCTATGCTCCTCCAGAGTATGGAACGAGTTATGAGGTATCAACACAAGGTGATGTATATTCTTTTGGTATTCTTATGTTGGAGATGTTAACCGGAAAAAGACCAACTGACCTAATGTTTGAAGATAGCCACGATCTTCATAGCTATGTTAAAGCTGCACTTCCAAACAATCTTTTGGAGATTGTGGACGCTGCTCTCATACCCCAAGAAATACAACAGACAACAACAGAAGCAGAAGGAGAAATTAGGATGGAGGAGGTGGCTGTAATGCATCCCAACCATGAGAAGACTCTAATTTCATTACTTGAGATTGGGCTTGCTTGTTCCGTACAATCTCCAAAAGAAAGGATGAACATGAAGGATGTACTGAGGGAGCTAAGTCGAATTAAGAATGCTTTTGGTCTAGGGCAAACAAGTCAAAATTGA 1410 0.3851 MPPSLPLMRGLTHLDISRNNLSGTILIGLQNNSFLQYLNVSFNMFHGEVPIEGVFSNTSAISVTGNVNLCGGISELHLPPCPKKVDRKRKHNLKIMVFVICVAFSLLLISLFAFYWRRERNKKSSSTSSRVEQFPKVTYQNLHIATEGFSTNNLIGSGSSGSVYKGMLESEDKAVAIKVLDLQKKGAEKSFISECNALKNIRHRNLVKILTCCSSMDYKGQEFKALVFEYMSNGSLEKWLHPNQDCAYWSTLDIFQRLNVIYDVASALHYLHYENEQPVVHCDLKPSNVLLDDDMVAHVSDFGLARLLATINGSSQDQASTSRIKGTIGYAPPEYGTSYEVSTQGDVYSFGILMLEMLTGKRPTDLMFEDSHDLHSYVKAALPNNLLEIVDAALIPQEIQQTTTEAEGEIRMEEVAVMHPNHEKTLISLLEIGLACSVQSPKERMNMKDVLRELSRIKNAFGLGQTSQN 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0332 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 279 291 IPR008271 GO:0004672|GO:0006468
Lele41g0332 469 Gene3D Phosphorylase Kinase; domain 1 112 230 - -
Lele41g0332 469 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 231 467 - -
Lele41g0332 469 SUPERFAMILY L domain-like 2 71 - -
Lele41g0332 469 FunFam LRR receptor-like serine/threonine-protein kinase EFR 120 230 - -
Lele41g0332 469 Gene3D Transferase(Phosphotransferase) domain 1 231 465 - -
Lele41g0332 469 SUPERFAMILY Protein kinase-like (PK-like) 122 454 IPR011009 -
Lele41g0332 469 SMART serkin_6 149 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0332 469 ProSitePatterns Protein kinases ATP-binding region signature. 155 178 IPR017441 GO:0005524
Lele41g0332 469 ProSiteProfiles Protein kinase domain profile. 149 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0332 469 Gene3D Ribonuclease Inhibitor 1 90 IPR032675 -
Lele41g0332 469 PANTHER OS04G0122200 PROTEIN 2 458 - -
Lele41g0332 469 Pfam Protein kinase domain 150 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0332 Lele-ChrLele41 2708117 2709661 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0332 3 461 Receptor kinase-like Gene Family AT3G47570 45.666 1.45e-131 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele41g0332 Pkinase 1.5e-44 CL0016