Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele41g0306 | ATGTCAGTTCAACTCAAGGAAGGAGGAGTAGTTTCTGCTTCCTCTTCCTCTTCTTCATGGAACCACCACAGGCTCAACAACAACAATCATACCCACAACCCTTTCCCTCTTCACAAGATCAGCAAAATCGAAGAAAGCGATGAAGAACTGTTCAGAGTGCCGGACATGGAAGCGACGGCCGGAGGCGGTGGAGAGTGTGGGGGTGAAGGAGGAGGAGGGGCTGTTGTTTCGAACGGGAATGAGAAGGCAGCGGCGAGCTTAAGCAATGTGACAGTGACGGTGACAGATGGTCAGTTTCAGAGTAATGGAAAACGAAGAAGAGGAAGAAATCCTGCAGATAAAGAGTGCAGACGCCTTAAGAGGTTGTTAAGGAATAGGGTATCAGCACAGCAAGCAAGAGAAAGGAAGAAGGTATATGTGAATGAGTTGGAAGGAAGAGCCCAGGAGTTGCAAGACAAGAATTGCGAGTTGGAAGAGCGTATCTCTACTTTGATCAATGAGAACACTATGCTTCGTAAGGTTCTTATGAACACAAGGCCTAAACCTGATGACTCCACCGAACAACCAAAGCAGGATTAG | 579 | 0.475 | MSVQLKEGGVVSASSSSSSWNHHRLNNNNHTHNPFPLHKISKIEESDEELFRVPDMEATAGGGGECGGEGGGGAVVSNGNEKAAASLSNVTVTVTDGQFQSNGKRRRGRNPADKECRRLKRLLRNRVSAQQARERKKVYVNELEGRAQELQDKNCELEERISTLINENTMLRKVLMNTRPKPDDSTEQPKQD | 192 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele41g0306 | 192 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 115 | 178 | IPR004827 | GO:0003700|GO:0006355 | |
| Lele41g0306 | 192 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
| Lele41g0306 | 192 | FunFam | Transcription factor HY5 | 136 | 177 | - | - | |
| Lele41g0306 | 192 | Gene3D | Single helix bin | 136 | 177 | - | - | |
| Lele41g0306 | 192 | SMART | brlzneu | 113 | 177 | IPR004827 | GO:0003700|GO:0006355 | |
| Lele41g0306 | 192 | Coils | Coil | 133 | 167 | - | - | |
| Lele41g0306 | 192 | MobiDBLite | consensus disorder prediction | 57 | 77 | - | - | |
| Lele41g0306 | 192 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 120 | 135 | IPR004827 | GO:0003700|GO:0006355 | |
| Lele41g0306 | 192 | SUPERFAMILY | Leucine zipper domain | 117 | 176 | IPR046347 | GO:0003700|GO:0006355 | |
| Lele41g0306 | 192 | CDD | bZIP_HY5-like | 127 | 168 | - | - | |
| Lele41g0306 | 192 | Pfam | bZIP transcription factor | 114 | 173 | IPR004827 | GO:0003700|GO:0006355 | |
| Lele41g0306 | 192 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
| Lele41g0306 | 192 | PANTHER | TRANSCRIPTIONAL ACTIVATOR HAC1 | 14 | 185 | IPR044280 | GO:0000981|GO:0045944 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele41g0306 | Lele-ChrLele41 | 2502842 | 2504198 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele41g0306 | 101 | 184 | Basic region leucine zipper (bZIP) Transcription Factor Gene Family | AT3G17609 | 78.571 | 1.91e-40 | 132 |
Transcription factors information