Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0299 ATGGGCAATTGTGGCACCAGAGAGGAATCGGCTGTTGTCTCCAATGCTCAAGTTCAACAGTTGCATATGTCGTCCTTGACTTCTAAAAGTGCAGCCAACGAGAAGAAGCATAATCGGTCTGTGTCAGATCTGAGCGACATTTCTACCCCGCGTCACAACTTCGAGGATATCAGGAAGAATACACTACTCTATACTCATGTCATTGCTTTTACATTGTATGAGCTCGAGACTATTACTAAGAGTTTTCGCTCCGATTATATCCTCGGAGAAGGGGGGTTCGGCACTGTCTATAAAGGTTACATTGACGAGAATGTGAGAGTTGGGCTCAAATCCCTTCCTGTTGCTGTCAAGGTTCTAAACAAGGAGGGTCTTCAGGGACATCGCGAGTGGCTTACAGAAATCAATTTCCTTGGACAGCTTAGGCATCCTAATTTGGTTAAGTTGATCGGATACTGCTGTGAGGACGATCACAGGCTACTTGTATACGAGTTCATGTTTCGAGGAAGTTTAGAGAATCATCTATTCCGAAAGGCAACTGTTCCTTTATCATGGGCTACAAGAATGATGATTGCCCTTGGAGCTGCTAAGGGCCTTGCTTTTCTTCATAATGCTGAAAGGCCAGTAATCTATCGAGACTTCAAAACTTCTAATATATTATTGGATTCTGATTATACAGCCAAGCTTTCTGATTTTGGACTAGCAAAAGCTGGACCACAAGGTGATGAAACCCATGTGTCCACCAGGGTTATGGGTACCTATGGGTATGCTGCCCCTGAATATGTAATGACTGCATTGGGGAACAACTCAGACATATCTTTCGTGCATTCACCAGTAGAGGATATGAATGGCAAGATACTCGATCCTAGATTGGAAAACCAATACTCAGTGAGGGCAGCACAGAAAGCATGTAGCTTGGCTTACTACTGTTTGAGTCAGAATCCGAAAGCCAGGCCGTTAATGAGTGATGTAGTCGAGACATTGGAACCCTTACAAAGTTGTATTGACGGTGCTGGTGAAGTCTCATCATTCGGATCAAGTAATGCAGGTGGTGGTCCCTTTGCCATGACTGGAATCTCCGACTACCGGATGCGCCAGAGGTTTTCAAACAATGAAACTGAGGAAGATCAGTGTCCCTTTGAGATGCTTGAGGATGTTGTTATGATTTTCTTTTCTTTGAAGCCTAAGAAGTTTGCTTGCGCCTCCATTTTGATGTTTTGA 1218 0.4401 MGNCGTREESAVVSNAQVQQLHMSSLTSKSAANEKKHNRSVSDLSDISTPRHNFEDIRKNTLLYTHVIAFTLYELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEINFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTALGNNSDISFVHSPVEDMNGKILDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSCIDGAGEVSSFGSSNAGGGPFAMTGISDYRMRQRFSNNETEEDQCPFEMLEDVVMIFFSLKPKKFACASILMF 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0299 405 MobiDBLite consensus disorder prediction 24 45 - -
Lele41g0299 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Lele41g0299 405 FunFam Serine/threonine-protein kinase BIK1 48 164 - -
Lele41g0299 405 ProSitePatterns Protein kinases ATP-binding region signature. 88 117 IPR017441 GO:0005524
Lele41g0299 405 ProSiteProfiles Protein kinase domain profile. 82 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0299 405 SUPERFAMILY Protein kinase-like (PK-like) 51 327 IPR011009 -
Lele41g0299 405 Pfam Protein tyrosine and serine/threonine kinase 87 326 IPR001245 GO:0004672|GO:0006468
Lele41g0299 405 PANTHER OS01G0588500 PROTEIN-RELATED 37 331 - -
Lele41g0299 405 Gene3D Transferase(Phosphotransferase) domain 1 165 338 - -
Lele41g0299 405 Gene3D Phosphorylase Kinase; domain 1 14 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0299 Lele-ChrLele41 2439822 2443755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0299 70 343 Glycoside Hydrolase AT3G07070 45.631 1.27e-78 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele41g0299 PK_Tyr_Ser-Thr 1.6e-35 CL0016