Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0297 ATGAAGTCGGGCTTAGATGGGTTGATAGATAAACTTTTGGAAGCGAGGAAAAACAGAGCTAAGATGATTCAATTAATTGAACCAGAAATTCGCAATCTCTGCCTCACTGCTAAAGAAATCTTCCTTAACCAACCTAACCTTCTTGAGCTTGAAGCTCCCATCAACGTTTGTGGGGACATACATGGGCAATACCCAGATCTGTTGAGATTGTTCGAGTACGGTGGTTTTCCGCCGCAGTCGAATTACCTCTTTCTCGGAGACTACGTCGACAGAGGGAAACAGAGTGTGGAAACCATATGTCTCCTTCTCGCTTACAAGATCAAATTCCCGGAGAACTTTTTCCTTCTACGAGGGAATCACGAATGCGCCTCCATTAACAGAATATACGGATTCTATGACGAGTGCAAGAGGAGATTCAGCGTGCGACTCTGGAAGATCTTCACCGATTGTTTCAATTGCCTGCCCGTCGCGGCGGTGATCGACGACAAGATCCTGTGTATGCACGGCGGCCTGTCGCCGGAGATGGAGAACATGAATCAGATTAAGGATATAGAGAGGCCGGTGGATGTGCCGGATCAGGGATTGTTGTGCGATTTGCTTTGGGCTGATCCCGATAGAGAAATCAAGGGTTGGGGTGAGAATGACAGAGGGGTGTCGTTCACTTTCGGAGCTGACAAGGTTGCAGAGTTCTTGAAGAAGAATGATCTGGATCTCATATGTCGCGCTCACCAGGTGGTGGAGGATGGGTATGAGTTCTTTGGAGAGAGACAACTAGTGACAATATTCTCAGCACCAAACTACTGTGGAGAGTTCAACAACGCAGGGGCACTCATGTGTGTGGACGAGACATTACTCTGTTCTTTTCAGATTCTCAAACCTTGGAGAGGAAAAGCCCCTCCTTCTCAACTTGAATAA 915 0.4721 MKSGLDGLIDKLLEARKNRAKMIQLIEPEIRNLCLTAKEIFLNQPNLLELEAPINVCGDIHGQYPDLLRLFEYGGFPPQSNYLFLGDYVDRGKQSVETICLLLAYKIKFPENFFLLRGNHECASINRIYGFYDECKRRFSVRLWKIFTDCFNCLPVAAVIDDKILCMHGGLSPEMENMNQIKDIERPVDVPDQGLLCDLLWADPDREIKGWGENDRGVSFTFGADKVAEFLKKNDLDLICRAHQVVEDGYEFFGERQLVTIFSAPNYCGEFNNAGALMCVDETLLCSFQILKPWRGKAPPSQLE 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0297 304 Gene3D - 1 298 IPR029052 -
Lele41g0297 304 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 17 295 - -
Lele41g0297 304 Pfam Calcineurin-like phosphoesterase 53 245 IPR004843 GO:0016787
Lele41g0297 304 PRINTS Serine/threonine phosphatase family signature 178 205 IPR006186 GO:0016787
Lele41g0297 304 PRINTS Serine/threonine phosphatase family signature 149 175 IPR006186 GO:0016787
Lele41g0297 304 PRINTS Serine/threonine phosphatase family signature 235 255 IPR006186 GO:0016787
Lele41g0297 304 PRINTS Serine/threonine phosphatase family signature 257 273 IPR006186 GO:0016787
Lele41g0297 304 PRINTS Serine/threonine phosphatase family signature 115 139 IPR006186 GO:0016787
Lele41g0297 304 PRINTS Serine/threonine phosphatase family signature 53 80 IPR006186 GO:0016787
Lele41g0297 304 PRINTS Serine/threonine phosphatase family signature 82 109 IPR006186 GO:0016787
Lele41g0297 304 SUPERFAMILY Metallo-dependent phosphatases 21 295 IPR029052 -
Lele41g0297 304 CDD MPP_PP1_PPKL 5 293 - -
Lele41g0297 304 FunFam Serine/threonine-protein phosphatase 1 302 - -
Lele41g0297 304 Pfam Serine-threonine protein phosphatase N-terminal domain 5 51 IPR031675 -
Lele41g0297 304 ProSitePatterns Serine/threonine specific protein phosphatases signature. 116 121 IPR006186 GO:0016787
Lele41g0297 304 SMART pp2a_7 25 295 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0297 Lele-ChrLele41 2421810 2426259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0297 32 241 Calmodulin-binding Proteins AT5G63870 31.600 3.89e-31 116