Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0295 ATGAAGACGGAAGAATCTCGTAAACGGAGGAACCTCTGCCTGCCCGTCACGGCAGCTCTGGTGATCGCAATTGTCTTAATCGTGGTGGTTTTAGCCTTCACGTTGTTCAAACCCAAGCGTACCATCGACACCGTCGATTCCATCACGATTCAGGAGATGCACGTCGGTCTCAATGTTGCTAAGCTCATCGTAGATCTCAACATCACCCTCGGCATCCAAGTCTCCATCATTAACCCGAATCATGTCGGATTCAAGTACTCCGAATCCAACGCTCTCCTCAATTACAGAGGCCAGCTAGTCGGAGAAGCACCAATTCCTGCCGGAGAGATCTCCGCCGGCGAGAAAGAGACCATAAAAGTCAGTCTCACCATCATGGCGGACCGCCTCCTCTCTAATTCTCAGCTTTTCTCCGATTATTTCTCCGGTTCGTTGCCTCTCAGCACTTGGATTAAGATTTCTGGGGAAATAAGCATCTTAGGGTTCATTCATGTTGGTGTGGTTTCAACTTCGTCATGTGATTTTTCCATCAATATCTCCAATAAAACTATAGGCCATAGAGAGTGCCGTTACAAAACTAAGCTTAATTAA 588 0.4711 MKTEESRKRRNLCLPVTAALVIAIVLIVVVLAFTLFKPKRTIDTVDSITIQEMHVGLNVAKLIVDLNITLGIQVSIINPNHVGFKYSESNALLNYRGQLVGEAPIPAGEISAGEKETIKVSLTIMADRLLSNSQLFSDYFSGSLPLSTWIKISGEISILGFIHVGVVSTSSCDFSINISNKTIGHRECRYKTKLN 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0295 195 SUPERFAMILY LEA14-like 66 164 - -
Lele41g0295 195 Pfam Late embryogenesis abundant protein 74 160 IPR004864 -
Lele41g0295 195 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 6 180 - -
Lele41g0295 195 Gene3D - 36 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0295 Lele-ChrLele41 2409992 2410579 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g0009 39 89230 91371 Lele41g0295 41 2409992 2410579 CCT
Lele40g1238 40 22147559 22148834 Lele41g0295 41 2409992 2410579 CCT
Lele41g0295 41 2409992 2410579 Lele43g1075 43 19212805 19213392 hybridization
Lele41g0295 41 2409992 2410579 Lele44g1059 44 19303179 19303763 hybridization