Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0283 ATGTCTGGTTTGTATAATCCGAACTTCTCTCACGCTAGAGCGGCTTCTCCTCAGATTAGAAGCACCCCGGATGTGGATAGTCAGTACTTGTCGGAGTTGCTAGCAGAGCATCAGAAGCTTGGACCCTTCATTCAAGTCCTTCCGATATGCAGTCGACTGTTAAATCAAGAAATATTGAGAGTTTCTGGGATGGTGTCCAACCGAAGTTTTGGTGATTTTGATAGACTGCGGAATAGAAGCCCGAGTCCTATGGCTTCTTCAAATCTCATGTCAAATGTCACTGGAACTGGATTAGGTGGCTGGAATCCCCAGGAGATTTTGTGGACCGACTGGAATGACAATGGACTGGCAAGGCTTCTGGGACCCAGAGGCAACTCTCTGAAACGCGTAGAAGTTAGTACAGGATGCCGTGTGTATATTAGAGGAAAAGGATCAATAAAGGATCCAGACAAGGAAGAGAAATTAAGAGGAAGACCAGGCTATGAACATCTCAATGAACCGCTGCATATTTTGATCGAGGCTGATTTACCTGCAAGTATTATTGACTTAAGGCTTAGACAGGCACAGGAAATTATAGAAGAATTGCTCAAACCTATGGACTTCATTAAGAGGCAGCAGCTGCGTGAACTGGCTATGCTGAATTCAAATTTCAGAGAAGAGAGTCCTGGACCAAGTGGTAGTGTATCTCCATTCAATTCAAGTGGAATGAAACGTGCGAAAACAGCAGCTACAGAAAGAATAAGTTATAACACAATTCTTGCTAGCTGGCTAGCATTCTGGTGGTTTTGGTCCTTTCTGAACAGAGTTGGAAAAGGAAGATTAAAACAACCCCCCTCATTGCTCCAAGACTCGGTCAACGCAATACGTTGCGTTTCCAGCCTCCAAATTCCACCTCATTCCTCAATCCCTTATCGGCTTCTCCATTTTGCACCCTGTAGAAGCCCTCCGTTCTCTTCGTCGACGTTGAGCTCCACCAGCACAGCAGCTCTGTGCACCGTCGCCATCTGCTGGCCACCGTCGAAGTCCAGTGGCTTTGAAGTCCAGAAGCCACTTGTCTGTCAGCGCCATAGCTTCACCCCCTTCCACCTCCGCGTCCTCGTCGTCTACTTGCAGCTTGTGCTCGTCGTCCTCTCACCCCCTTCCCCTTCACCATTTTCTGGCCAAACTGTTCGATTCATCTACCTGCTCGGTGAGATTTTCCATCCTTCCCTGTCTCACTCTCGATTCATCTCTCTCAATCCTTCACCTGGATGCTCAATTTTCTCTTCTACAAAATGTCCGATTCATGAAAGCAAATTCTGTCGCCTTCTTCCACGGAGATTAGGGTTTTCAGTCTGTGTCTTTAATCATTTTTCTCTCTATCTTCCTGCTCGTCTCGGGAAATTTTGA 1389 0.4658 MSGLYNPNFSHARAASPQIRSTPDVDSQYLSELLAEHQKLGPFIQVLPICSRLLNQEILRVSGMVSNRSFGDFDRLRNRSPSPMASSNLMSNVTGTGLGGWNPQEILWTDWNDNGLARLLGPRGNSLKRVEVSTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPASIIDLRLRQAQEIIEELLKPMDFIKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTAATERISYNTILASWLAFWWFWSFLNRVGKGRLKQPPSLLQDSVNAIRCVSSLQIPPHSSIPYRLLHFAPCRSPPFSSSTLSSTSTAALCTVAICWPPSKSSGFEVQKPLVCQRHSFTPFHLRVLVVYLQLVLVVLSPPSPSPFSGQTVRFIYLLGEIFHPSLSHSRFISLNPSPGCSIFSSTKCPIHESKFCRLLPRRLGFSVCVFNHFSLYLPARLGKF 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0283 462 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 113 218 IPR036612 GO:0003723
Lele41g0283 462 Pfam Homodimerisation region of STAR domain protein 23 70 IPR032377 -
Lele41g0283 462 PANTHER RNA-BINDING PROTEIN RELATED 18 105 IPR045071 -
Lele41g0283 462 CDD SF1_like-KH 114 218 - -
Lele41g0283 462 Gene3D K Homology domain, type 1 19 224 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0283 Lele-ChrLele41 2305747 2318162 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0283 41 2305747 2318162 Lele41g0283 41 2305747 2318162 ECH
Lele41g0283 41 2305747 2318162 Lele43g1087 43 19296658 19302052 hybridization
Lele41g0283 41 2305747 2318162 Lele44g1071 44 19419106 19420380 hybridization