Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0282 ATGGATGATGCTGGGCATCGTGAAAATGGAAGGCACAAAGCCGATCAATATAAATCAGCTCAGGGGCAGTGGCTGATGCAACATCAACCATCCATGAAGCAAATTATGGCAATTATGGCCGAAAGAGATGCAGCCATTCAAGAGAGAAATCTAGCCCTTTCTGAAAAAAAGGCAGCCCTTGCAGAGCGTGATATGGCATTCTTGCAACGAGATACTGCCATCCAAGAACGGAATAATGCCATCATGGAACGAGATAATGCAATTGCTACCCTTCAGTATCGAGAGAACTCCTTAGCCAATGGTAGCATGTCTTCTTGTCCTCCAGGATGCCAAATTGCCCGAGGTGTCAAGCATGTGCATCATCCTCAGCAACAAGTCCCCCATTTACCTCATATGGGTGAAACTTCTTACAGCGCTCGAGAAATGCACACTAGTGATGACCTTCCAACAGCATCCATGCCTAATGAAGCTGGGAAATCACGGCGGGCTAAGCGACCCAAGGATGGTAAGTCAATTTCACCTAGTAAGAAGACACCAAGAGCTGCAAAAAAGCTCAAGAGGGAGGGTGAAGACTTAAATAAGATGATGTTTGGCAAGGCACATGAATGGAAGAGTGGTCAGGAAATGGTTAATGGAGGTGATGATCTTAACAAGCAGTTAGACCCATCAAAGGCAGATTGGAAAGGTCAAGACTTGGGGTTGAACCAGGTAGTATATGATGAGTCAACAATGCTAGCACCTGTATGCTCTTGTACTGGTGTTCTGAGACAGTGCTACAAATGGGGGAATGGGGGCTGGCAGTCTGCTTGTTGCACAACAACTCTATCAATGTATCCACTTCCAGCAGTGCCCAACAAGAGGCATGCTAGGGTTGGTGGACGAAAGATGAGCGGAGGCGCTTTCAATAAGCTTCTTAGCCGGCTTGCAGCAGGGGGCCATGATCTATCAAACCCAGTTGACCTGAAGGACCATTGGGCCAAACATGGCACGAACCGCTATATCACAATCAAGTAG 1014 0.4714 MDDAGHRENGRHKADQYKSAQGQWLMQHQPSMKQIMAIMAERDAAIQERNLALSEKKAALAERDMAFLQRDTAIQERNNAIMERDNAIATLQYRENSLANGSMSSCPPGCQIARGVKHVHHPQQQVPHLPHMGETSYSAREMHTSDDLPTASMPNEAGKSRRAKRPKDGKSISPSKKTPRAAKKLKREGEDLNKMMFGKAHEWKSGQEMVNGGDDLNKQLDPSKADWKGQDLGLNQVVYDESTMLAPVCSCTGVLRQCYKWGNGGWQSACCTTTLSMYPLPAVPNKRHARVGGRKMSGGAFNKLLSRLAAGGHDLSNPVDLKDHWAKHGTNRYITIK 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0282 337 MobiDBLite consensus disorder prediction 158 174 - -
Lele41g0282 337 Pfam GAGA binding protein-like family 1 337 IPR010409 -
Lele41g0282 337 PANTHER - 1 337 IPR010409 -
Lele41g0282 337 MobiDBLite consensus disorder prediction 1 21 - -
Lele41g0282 337 MobiDBLite consensus disorder prediction 141 190 - -
Lele41g0282 337 Coils Coil 51 71 - -
Lele41g0282 337 MobiDBLite consensus disorder prediction 1 15 - -
Lele41g0282 337 SMART GAGA_bind_2 1 337 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0282 Lele-ChrLele41 2304274 2305425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0282 65 337 BBR or BPC Transcription factor family AT5G42520 62.671 2.21e-117 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lele41g0282 GAGA_bind 3e-104 No_clan