Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0281 ATGACAATTGTATCTCCTATGGAGACGAATTTTAGAGGCATGCCTGCAAATTGCAATGCCCGGTGGTTCTGGCTGGTGGGGATGATTGAAATCAAAGCTAATATTGCAGATGTTGATCATGTTGCTTTGAGCAGGACATTCCTGGCCGTAGAATATTATACAGAATTTCCTTCTCACATTCATTCGCCCAAACCCATCACACTCTTCCGTCTTCCTCTTGTTCATTCCTCACCCTCATTCTCTCACCTTCATATCGTGGGTTTAGGCCGAACAACCATGGCAGCCATGGCTCAGCTCCGTGTTTCTCCCCTCTCTCGCTCATACCACACCGTTTCAGGGTCAGACGCTCGCGCATTCAGTCCCCGTTCCATTATTTCGTTCCCATCTTCTTTTCACACTCGAAATCGATCTCTGCCTCTCATCAACCCAAAGGTCTACGAGCCCAATTTGCCGGAGAATCTGCAAATTTCATTCGCCGGCGGTGATGGTAGCGATGGAGTCGGGCGCGGAGGAGACGACAACGGCAACCGTGGTAGCGGAAATTGGGGAAACAACGATGATCATCCATCTTCACCTTCGTCTAACGGACTCGGTATTCTGGGCATGTTTCTAGCAGGATGGAGATCGAGGGTTGCCGCGGATCCCCAATTTGGTTTCAAGGTTCTGATGGAAGAATTGGTGGGTGTGAGCGCTTGTATAATCGGAGACATGGCTTCTCGTCCAAATTTTGGATTAAACGAGCTTGATTTCGTTTTCTCCACACTTGTCGTCGGATCAATTCTGAATTTCACGCTTATGTATCTATTAGCACCCACTGTGGCTTCTGCTTCATCCTCAAAACTACCTTCAATCTTTGCAAGTTGCCCTACGAGCCACATGTTTGAACCAGGTGCTTATGGGATCGTCGATCGATTTGGAACACTGGTATACAAAGGAACCGTGTTTGCAGCAGTTGGATTTGCAGCTGGGCTTGTAGGAACTACGATTTCAAATGGGTTAATCATGATCAGGAAGAAGATGGATCCAAATTTTGAGACACCAAACAAGCAACCTCCGACATTGTTGAATGCTATGACATGGGCGGCTCACATGGGAGTTAGCAGCAATCTGAGGTACCAAACTCTGAATGGGATTGAATTTGTGTTGGAGAAAGGGCTTCCTCCATTGGCATTCAAATCATCTGTGCTTGTTCTGAGATTGTTGAACAATGTTGTTGGAGGCATGACGTTTGTGATACTGGCGAGGTTCACTGGTTCACAAAGTGTATCAGAACAACAAAAGCCATTAGCTCTTGCGGCACAGAAGGAGAGCTTGGAGAGCAAAGAAGAGGATTTGCAGAGCTCAAAGTGA 1350 0.4696 MTIVSPMETNFRGMPANCNARWFWLVGMIEIKANIADVDHVALSRTFLAVEYYTEFPSHIHSPKPITLFRLPLVHSSPSFSHLHIVGLGRTTMAAMAQLRVSPLSRSYHTVSGSDARAFSPRSIISFPSSFHTRNRSLPLINPKVYEPNLPENLQISFAGGDGSDGVGRGGDDNGNRGSGNWGNNDDHPSSPSSNGLGILGMFLAGWRSRVAADPQFGFKVLMEELVGVSACIIGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTVASASSSKLPSIFASCPTSHMFEPGAYGIVDRFGTLVYKGTVFAAVGFAAGLVGTTISNGLIMIRKKMDPNFETPNKQPPTLLNAMTWAAHMGVSSNLRYQTLNGIEFVLEKGLPPLAFKSSVLVLRLLNNVVGGMTFVILARFTGSQSVSEQQKPLALAAQKESLESKEEDLQSSK 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0281 449 MobiDBLite consensus disorder prediction 177 191 - -
Lele41g0281 449 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 198 435 - -
Lele41g0281 449 MobiDBLite consensus disorder prediction 157 191 - -
Lele41g0281 449 Pfam Protein RETICULATA-related 210 378 IPR021825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0281 Lele-ChrLele41 2295834 2303823 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0281 41 2295834 2303823 Lele37g1412 37 22844865 22849540 CCT
Lele41g0281 41 2295834 2303823 Lele38g1289 38 23635398 23640125 CCT
Lele41g0281 41 2295834 2303823 Lele39g0012 39 96635 101248 CCT
Lele41g0281 41 2295834 2303823 Lele40g1236 40 22136749 22141407 CCT
Lele41g0281 41 2295834 2303823 Lele43g1089 43 19311197 19317902 hybridization
Lele41g0281 41 2295834 2303823 Lele44g1073 44 19430454 19431536 hybridization