Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0279 ATGACTTTATTTTTTGATTCAGTTCTGTACATTCGGACTCCGATTTCTTCAAATGGCATTTCGGGGTTTCTGTCTGTATACTTGTTTAATTTTGCTCTGATGGAAGAAATTTTAGGCCTACGATATATCAATCTTAATGTTATTGGGATGCTGGGTCCGAGATTATATGGATTTGGATTGGCTTTTTCGTTTTTCTGTTTCATTCTCACAGCAGCAGCACAAAATACAGATCCTTCGGAAGTGAATGCACTGGTCCAAATCAAGAAAAGTTTGATTGATCCCAAGAACCATCTGAGGAACTGGAACAAGGGCGACCCATGTAATTCAAACTGGACTGGTGTTTGGTGTTTTGATAGGGTTGGGACCGATGGATACCTACATGTCCATGAGCTTTACTTAATGACTTCGAATCTCTCGGGAAGTCTAGCACCTCAACTTGGTCTGCTATCTCGGCTTCAGATAATGAATTTTATGTGGAATGATCTGACAGGCACCATACCAAAGGAGATAGGAAATATCAAATCATTGAAACTCTTACTCCTGAATGGCAATAAGTTATCCGGTTCTTTGCCTGATGAACTTGGCTATCTCTCAAACTTGAATAGGCTCCAAGTTGACCAAAACCAATTGTCAGGTCCAATACCACAATCGTTTGCCAACATGGTCAATGTTAAACACCTCCACTTGAACAACAACTCATTCACTGGTCAAATTCCACGGGAATTTTCAAAGCTACCCAATCTACAGCATTTGCTTGTGGACAATAACAACTTTTCTGGCCATCTTCCACCTGAATTTTCCATGTTACCGACCTTGCGCATACTCCAAGTTGATAACAATAATTTCAATGGAGCAGAAATTCCTTCTACCTATGCAAACTTTTCCAAGCTAGTAAAAATAAGTCTTAGAAACTGCAGCTTGGAAGGAGCTGTTCCTGATCTGAGTTCGATAAATGAGCTTAGCTATTTGGATCTTAGCTGGAATCATCTTACTGGATCCGTACCACCAAAGAAACTTTCAGATAATATGACAACTATTGACCTATCAAATAACAAGATCAACGGATCTATTGCTGAAATCTTCAAATTACTTCCTTCAATTCAAAGATTGTCACTAGCAAACAATTCTTTTTCTGGATCCATCCCTATCGGTATATTGCTGAACATGTCCTTCAGTAGGAGTGCTAAGCTCACAATTGATCTGCGCAATAATTCCTTTTCAGACATTTCAGGCAGTTCAAGTCTACCAGCAAATATCACCTTGAGGCTTGCTGGCAATCCTATCTGCAAGAATTCTAACATTAAAGATATCAGTCGATATTGTGCCTCCGAAGGGGTTGAATCTGACAAACCTATAAATTCAACATCTGCCTGTCCGGTTCAAGCTTGTCCAGGGGATGGTTCCTATGAATATATCCCAGCTTCTCCTGTTCCCTGCTATTGTGCAGCGCCTCTGAGAATCGGATATCGTCTGAAAAGCCCAAGTTTCTCGTACTTTCCTCCTTATAGAACTTATTTCGAGTTATATCTGGCTCAAAATTTACATTTGGACTTATACCAAGTTTGGATAGATTCAATTGCTTGGGAAGCAGGACCTCGTCTTAGGATGTATTTGAAACTTTATCCTAATTACAATGATTCCCACTCCCATGTGTTCAATATAAGCGAGGTCCGGCGTATTCAAGGCAAATTTGGATCATGGAATTTTCCTCGCACTGATTTTTTTGGACCATATGAACTCCTGAACTTCACTCTTCTTGGACCTTATGAACATTTAATTGGTGAAGAGACAAATAAGAGGAAGATCAGTACAATGTTATTGATAGTTGCCATAATTGCAGCTGTTGTTTGTGCTACCACGATCTCTGCAATTGTCACTCTCGTGATAGCCAAAAGACATATCAAATACCGTCCCATGCTATCGAGGAATCGTATGTCCTCTAATGTTTGCATCAAAATTGATGGTGTGAAAGCATTCACTTTCAAAGAACTGGCTCATGCAACTAACAATTTCAGCAGTTCAACTATAGTTGGCCAAGGAGGTTATGGGAAGGTTTATAAAGGAATTCTGTCTGATAAAACTGTTGTGGCCGTAAAGCGGGTAGACGAAGGTTCTTTACAAGGCCAAAGAGAATTTTTGACTGAGATTGAACTTCTATCAAGGTTACATCATCGAAATCTAGTCTCATTGGTTGGATACTGTAATGAAGAAGGAGAGCAGATTCTGGTTTACGAGTTCATGCCTAATGGTACCTTGCGGGAGTGGATTTCGGGTAAAAGGAAGGGAAACCTAAACTTTGGTATGAGGTTGAGGATTGCAATGGGTGCTGCCAGAGGCATACTGTATCTCCATGCCGAGGCTAACCCTCCTATATTCCACCGAGATATTAAAGCTAGCAACATACTTCTGGACCGCATTCTGGTCGCTAAAGTGGCTGACTTTGGACTCTCACGTCTTGCACCTAATATGGATGACGATGGAAACATGCCTAAATATGTGTCAACAGTTGTGAGGGGAACACCGGGATACCTTGATCCTGAGTACTTTTTGACTCACAAGTTAACGGACAAGAGTGATGTTTATAGCTTGGGAATTGTGTTTCTGGAGCTTTTGACAAGCATGCATCCAATATCACATGGAAAAAACATCGTCCGTGAGGTTAACGAGGCTCGTCAGTGTGGGACGATATCTTCGATTATAGATAGCAAAATGGGTTCTTATCCATCTGATTGTGCGGAGAAGTTTCTAAATCTTGGTCTCAGTTGTTGCCATGAGAATCCAGAGGAGAGACCATGCATGACAGATGTGGTGAGGGAGCTGGAGATTATTCTTTCAATGTTGCCAGATTCCGAAACTGCTTTCCCGGACAGTCCATCTGATTTTTCTGTCAAAATGGCTTCAACATCATCATCTTCATCAACATCCTACATGGCAAGAGACGGCAACCAACACATGTCCTCTCCTATGTTGTCAGGAAGCAACCTCGTAAGCGATGTTATTCCCACCATTGTTCCTCGTTAA 3021 0.4105 MTLFFDSVLYIRTPISSNGISGFLSVYLFNFALMEEILGLRYINLNVIGMLGPRLYGFGLAFSFFCFILTAAAQNTDPSEVNALVQIKKSLIDPKNHLRNWNKGDPCNSNWTGVWCFDRVGTDGYLHVHELYLMTSNLSGSLAPQLGLLSRLQIMNFMWNDLTGTIPKEIGNIKSLKLLLLNGNKLSGSLPDELGYLSNLNRLQVDQNQLSGPIPQSFANMVNVKHLHLNNNSFTGQIPREFSKLPNLQHLLVDNNNFSGHLPPEFSMLPTLRILQVDNNNFNGAEIPSTYANFSKLVKISLRNCSLEGAVPDLSSINELSYLDLSWNHLTGSVPPKKLSDNMTTIDLSNNKINGSIAEIFKLLPSIQRLSLANNSFSGSIPIGILLNMSFSRSAKLTIDLRNNSFSDISGSSSLPANITLRLAGNPICKNSNIKDISRYCASEGVESDKPINSTSACPVQACPGDGSYEYIPASPVPCYCAAPLRIGYRLKSPSFSYFPPYRTYFELYLAQNLHLDLYQVWIDSIAWEAGPRLRMYLKLYPNYNDSHSHVFNISEVRRIQGKFGSWNFPRTDFFGPYELLNFTLLGPYEHLIGEETNKRKISTMLLIVAIIAAVVCATTISAIVTLVIAKRHIKYRPMLSRNRMSSNVCIKIDGVKAFTFKELAHATNNFSSSTIVGQGGYGKVYKGILSDKTVVAVKRVDEGSLQGQREFLTEIELLSRLHHRNLVSLVGYCNEEGEQILVYEFMPNGTLREWISGKRKGNLNFGMRLRIAMGAARGILYLHAEANPPIFHRDIKASNILLDRILVAKVADFGLSRLAPNMDDDGNMPKYVSTVVRGTPGYLDPEYFLTHKLTDKSDVYSLGIVFLELLTSMHPISHGKNIVREVNEARQCGTISSIIDSKMGSYPSDCAEKFLNLGLSCCHENPEERPCMTDVVRELEIILSMLPDSETAFPDSPSDFSVKMASTSSSSSTSYMARDGNQHMSSPMLSGSNLVSDVIPTIVPR 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0279 1006 FunFam Leucine-rich repeat protein kinase family protein 635 746 - -
Lele41g0279 1006 Gene3D Ribonuclease Inhibitor 338 470 IPR032675 -
Lele41g0279 1006 ProSitePatterns Protein kinases ATP-binding region signature. 677 699 IPR017441 GO:0005524
Lele41g0279 1006 Pfam Leucine rich repeat 198 258 IPR001611 GO:0005515
Lele41g0279 1006 Pfam Leucine rich repeat N-terminal domain 78 116 IPR013210 -
Lele41g0279 1006 ProSiteProfiles Protein kinase domain profile. 671 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0279 1006 SUPERFAMILY Protein kinase-like (PK-like) 656 976 IPR011009 -
Lele41g0279 1006 PANTHER RECEPTOR-LIKE PROTEIN 55 87 946 - -
Lele41g0279 1006 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 78 239 - -
Lele41g0279 1006 SMART serkin_6 671 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0279 1006 ProSitePatterns Serine/Threonine protein kinases active-site signature. 791 803 IPR008271 GO:0004672|GO:0006468
Lele41g0279 1006 Gene3D Transferase(Phosphotransferase) domain 1 747 953 - -
Lele41g0279 1006 Gene3D Ribonuclease Inhibitor 77 337 IPR032675 -
Lele41g0279 1006 SUPERFAMILY L domain-like 94 436 - -
Lele41g0279 1006 Gene3D Phosphorylase Kinase; domain 1 634 746 - -
Lele41g0279 1006 Pfam Protein kinase domain 673 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0279 1006 CDD STKc_IRAK 677 943 - -
Lele41g0279 1006 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 747 956 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0279 Lele-ChrLele41 2270330 2284096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0279 54 952 Receptor kinase-like Gene Family AT5G01950 60.465 0.0 1095
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lele41g0279 Pkinase 6.9e-48 CL0016