Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0272 ATGCGCAACACTAGAAGGTTCTGGGTGATGAGGAACATCGAAGGGTTTCTTCCATGGATTCTTCTTCTCTTAGCTTTTCAAGTTGTTCGAGCTGCGGACTACGTGCCTTCTGATAAAATCCTCTTGAGCTGTGGGGGTCCTCCAGATTCAACCGATACTGATGGAAGAAAATGGACTTCTGATGTTGGGTCCAAGTTCTTATCCTCAACGGGGAAGTCCAAGAAAGCTGAGGCTGCTACACAAGATCCCTCCGTGCCGGAAGTTCCGTTTATGACGGCGCGTGTGTTTCAGTCGGAATTCACCTACACTTTTCCGGTCGCATCTGGTCGGAAATTCATCCGTCTCTACTTCTACCCTTCTTCTTATGACGGACTTAATGCCTCCGATGCGATTTTCGCCGTCACTGCTCAATCCTACACGCTTCTCAGGAACTTCAGTGTTTCTCAAACGGTATTAGCTTTGAACTATGACTCTATGGTGAAAGAATATTTGGTCAATGTTGAAGGAGAGTCACTGAATGTAACTTTTACTCCGTCTCGCAATGCCTCTAATTCATATGCCTTTGTTAATGGGATTGAGATCGTGTCTATGCCTTCTGATATTTATGGTTCTACAAGTGATAGTCCTATGATTGTGGGTACAGGGACTCCTTACACTTTTGATAATAGCACTTCCCTTGAGACTGTTTATAGGCTTAATGTTGGTGGGAATGATATTTCGCCTTCCCATGATACTGGTTTGTTTAGGTCATGGACTGATGATACTAGGTATCTCTATGGTGCTGGTTATGGAGTCACTGAGCCTGCTGATCCTGAGGTTAACATCACTTATCCTCCAGGCACACCCTCTTATGTTGCTCCTATTGATGTCTACTCTACGGCTAGATCGATGGGGCCGAATGCGAATATCAATGTGAATTACAACTTGACTTGGATTTTCTCAGTTGATTCTGGGTTTTCTTATCTTGTGAGACTCCATTTCTGTGAGGGTTCTACCAATATCACCAAGATCAGTCAAAGAGTGTTCGATGTATTCATTGGTAATCAAACTGCTGAAGACGGAGCAGATGTTATCGCCTGGGCCGGCGCTTATGATCTTCCACATGATAATGGTGTTCCAGTGCATAGGGATTATGTTGCGTTTGTTCCTGCTGGGCAGCCACAACAGGACCTGTGGCTTGCACTACATCCAGATACTAAGTCACAGCCTCAGTACTATGATGCAATATTGAATGGAGTGGAGATATTCAAAATTAATGATGCTACGGGTAATCTTGCTGGGCCGAATCCTATTCCAGCTCCAGAGCAAGAGTTGATTGATCCGTCATTGGCTAGAAGCTCTAGTAAAGGCAAATCAAAGAGTCAGATAGGAGCGGTTGCTGGAGGTGTTAGTGGGGGAGTAGTTCTGTTAATCATTGGACTCATTGCCTGTTTTGTTTTGCATCGTAGGAGTCATGGCAAGAAGGATTCTGGTACAAGTGAAGGGCCATCTGGCTGGCTTCCTCTTTCTCTTTATGGCAACTCCCATTCCGCGGGTTCTGCCAAGACCAACACAACGGGAAGCTATGCATCATCACTCCCATCAAACCTTTGTCGGCATTTCTCATTTGCTGAAATTAAGGCTGCAACAAACAACTTCGATGAGGCTTTGCTCCTTGGTGTGGGAGGATTCGGTAAGGTTTACAAAGGAGAGATTGATGGTGGAACAACCAAAGTAGCAATTAAACGTGGGAACCCTCTTTCTGAGCAAGGTGTACATGAGTTCCAAACAGAGATTGAAATGCTCTCTAAACTTCGCCACCGGCATCTTGTTTCACTGATTGGCTACTGCGAAGAGAACACTGAAATGATCCTTGTCTATGACTACATGGCTTATGGAACTCTCCGGGAGCATCTATACAAGACCCAGAAGCCTCCATTACAATGGAAGCAAAGGCTTGAGATATGCATCGGAGCTGCTCGAGGTTTGCACTATCTACATACTGGTGCCAAGCACACTATCATCCACAGGGATGTGAAGACCACAAACATTTTACTGGATGAGAAGTGGGTAGCAAAGGTTTCTGATTTTGGATTGTCAAAAACTGGTCCAACATTGGATAACACGCATGTGAGCACCGTAGTTAAGGGTAGTTTTGGGTACTTGGATCCAGAATACTTCAGGAGACAACAACTGACTGACAAATCCGATGTTTACTCCTTCGGGGTGGTTCTTTTCGAGATCTTGTGCGCTCGCCCTGCTTTGAACCCAACCCTTCCTAAAGAGCAAGTGAGCCTAGCAGAGTGGGCTGCTCATTGCTACAACAAGGGCATTCTTGACCAGCTCGTCGATCCTTACTTGAAGGGCAAGATAGCCCCAGAATGCTTCAAGAAGTTTGCCGAGACCGCGATGAAGTGCGTGGCTGATCAGGGCATCGAGAGGCCATCGATGGGGGATGTGCTGTGGAACCTCGAGTTTGCTTTGCAGCTGCAAGAGAGTGCAGAGGAGAGTGGTAAAGGCATTGGAGGAATGCAAAACATTGATGAGGAGGAGCCAATGTATGTGAACTCCAAAGGGAAGAAGGACCCCAACGACGCATTACCGGGTTTCGACAGTAATGTAACCGATTCCCGAAGCTCAGGGATGAGTATGAGCATCGGTGGCCGGAGCTTGGCCAGCGAAGACTCTGATGGATTAACACCAAGTGCTGTGTTTTCTCAGATCATGAATCCAAAAGGGCGTTAA 2724 0.4622 MRNTRRFWVMRNIEGFLPWILLLLAFQVVRAADYVPSDKILLSCGGPPDSTDTDGRKWTSDVGSKFLSSTGKSKKAEAATQDPSVPEVPFMTARVFQSEFTYTFPVASGRKFIRLYFYPSSYDGLNASDAIFAVTAQSYTLLRNFSVSQTVLALNYDSMVKEYLVNVEGESLNVTFTPSRNASNSYAFVNGIEIVSMPSDIYGSTSDSPMIVGTGTPYTFDNSTSLETVYRLNVGGNDISPSHDTGLFRSWTDDTRYLYGAGYGVTEPADPEVNITYPPGTPSYVAPIDVYSTARSMGPNANINVNYNLTWIFSVDSGFSYLVRLHFCEGSTNITKISQRVFDVFIGNQTAEDGADVIAWAGAYDLPHDNGVPVHRDYVAFVPAGQPQQDLWLALHPDTKSQPQYYDAILNGVEIFKINDATGNLAGPNPIPAPEQELIDPSLARSSSKGKSKSQIGAVAGGVSGGVVLLIIGLIACFVLHRRSHGKKDSGTSEGPSGWLPLSLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYKGEIDGGTTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENTEMILVYDYMAYGTLREHLYKTQKPPLQWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCYNKGILDQLVDPYLKGKIAPECFKKFAETAMKCVADQGIERPSMGDVLWNLEFALQLQESAEESGKGIGGMQNIDEEEPMYVNSKGKKDPNDALPGFDSNVTDSRSSGMSMSIGGRSLASEDSDGLTPSAVFSQIMNPKGR 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0272 907 FunFam FERONIA receptor-like kinase 224 419 - -
Lele41g0272 907 SUPERFAMILY Protein kinase-like (PK-like) 521 819 IPR011009 -
Lele41g0272 907 SMART serkin_6 546 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0272 907 Gene3D Transferase(Phosphotransferase) domain 1 623 836 - -
Lele41g0272 907 ProSitePatterns Serine/Threonine protein kinases active-site signature. 667 679 IPR008271 GO:0004672|GO:0006468
Lele41g0272 907 Gene3D - 224 419 - -
Lele41g0272 907 Gene3D - 40 198 - -
Lele41g0272 907 Gene3D Phosphorylase Kinase; domain 1 508 622 - -
Lele41g0272 907 MobiDBLite consensus disorder prediction 847 907 - -
Lele41g0272 907 FunFam Receptor-like protein kinase FERONIA 518 622 - -
Lele41g0272 907 Pfam Malectin-like domain 42 418 IPR024788 -
Lele41g0272 907 PANTHER OS03G0124300 PROTEIN-RELATED 19 487 - -
Lele41g0272 907 FunFam Receptor-like protein kinase FERONIA 623 833 - -
Lele41g0272 907 MobiDBLite consensus disorder prediction 863 900 - -
Lele41g0272 907 Pfam Protein tyrosine and serine/threonine kinase 552 814 IPR001245 GO:0004672|GO:0006468
Lele41g0272 907 CDD STKc_IRAK 552 818 - -
Lele41g0272 907 FunFam FERONIA receptor-like kinase 39 198 - -
Lele41g0272 907 ProSiteProfiles Protein kinase domain profile. 546 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0272 907 ProSitePatterns Protein kinases ATP-binding region signature. 552 575 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0272 Lele-ChrLele41 2222036 2224759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0272 25 907 Receptor kinase-like Gene Family AT3G51550 73.702 0.0 1302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lele41g0272 Malectin_like 9.7e-45 CL0202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0272 41 2222036 2224759 Lele44g1082 44 19499447 19502170 hybridization