Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0270 ATGGTTTCCTCTCAGTTTTCTAATTTGCCTAAGACTGGCAATTGCAAACCATTCCAGACCCAAATACTCTTTCCTGCAAGCCTCACTGACAGTGTAATTACGGACCAAGTTGAGCTTGATTTCTCGGATGTCTTTGGTCCAGTTACAGTGCCTTCTTTAAAAGTGAATGACGCTGATTCTGCTATTGTTGAGCACGTGGAAGAATCAAGTGAACTCGTTTATGATGATCCAGCTGTCATTTATACCCGCTCACGTTCATTGGTTGGCCCTTCTTCTTGTGTTAGCCAATCACTTAAGCTTGGCAAACTTAGCCAATCACTTAAGCTTGGCAAACTCACTTTAAATGAAAGTGATGATTCATTGGAAGCAATGGAACATGTTGCTGGAGAGACCATTGAAGAAGTTGATGAATGTAATGGCAACAATGTCATCATTGAGGAGTCTCTTGAAGGTGATAATGGGCATCTCATGAAGATCCAGAAAGTGAGCATTGAAGATTTCGAGATTTTGAAGGTCGTGGGACAGGGAGCATTTGCAAAAGTATATCAAGTGAGGAAAAAGGGTACTTCTGAAATATATGCAATGAAGGTAATGAGAAAGGACAAAATTATGGAAAAGAACCATGCTGAATACATGAAAGCTGAGAGGGATATTTTAACCCAAATAGAGCACCCCTTTGTTGTTCAACTCAGATACTCTTTTCAGACAAAATACAGATTGTATCTTGTGCTGGATTTTGTAAATGGGGGTCATCTTTTCTTTCAGCTTTATCATCAAGGCCTTTTCAGAGAGGATCTAGCACGTATATATGCTGCTGAGATTGTTTCCGCAGTTTCCCATCTCCATGCAAATGGAATAATGCACAGGGATCTAAAACCTGAAAATATCCTGCTGGATGCTGATGGCCATGTAATGCTGACGGATTTTGGCCTGGCCAAGCAATTTGAAAGTGATACAAGATGTAATTCCATGTGTGGAACAATAGAATACATGGCACCTGAAATTATTCTTGGCAAGGGCCATGATAAGGCTGCTGATTGGTGGAGTGTAGGAATCCTACTGTATGAGATGCTTACTGGAAAGCCTCCCTTCTGTGGTGGAAACCGTGACAAGATTCAGCAGAAAATAATTAAAGACAAGATCAAGCTGCCAGCATTTTTGTCTAGTGAAGCACATTCACTTTTGAAAATGCTACTGCAGAAGGATGCGACTAAGCGATTAGGCAGTGGAACAAAGGGTAACTTGGAAATTAAAGATCACAAGTGGTTTAAACCAATCAATTGGAGGAAGTTGGATGCACGTGAGGTCCAACCAAGCTTTCGCCCTGAAGTCGCTGGAAAGCATTGTGTCGCCAACTTTGAGAAGCGCTGGACTGATATGCCCATCGTGGATTCACCGGCTGCTAGTCCAAATGGCGTCAATCCTTTCAAAGACTTCAGTTATGTGAGATCTGCAGCTTCTTTCCTTCAAAGGAATAGCCCTGCTTTCTAG 1491 0.4185 MVSSQFSNLPKTGNCKPFQTQILFPASLTDSVITDQVELDFSDVFGPVTVPSLKVNDADSAIVEHVEESSELVYDDPAVIYTRSRSLVGPSSCVSQSLKLGKLSQSLKLGKLTLNESDDSLEAMEHVAGETIEEVDECNGNNVIIEESLEGDNGHLMKIQKVSIEDFEILKVVGQGAFAKVYQVRKKGTSEIYAMKVMRKDKIMEKNHAEYMKAERDILTQIEHPFVVQLRYSFQTKYRLYLVLDFVNGGHLFFQLYHQGLFREDLARIYAAEIVSAVSHLHANGIMHRDLKPENILLDADGHVMLTDFGLAKQFESDTRCNSMCGTIEYMAPEIILGKGHDKAADWWSVGILLYEMLTGKPPFCGGNRDKIQQKIIKDKIKLPAFLSSEAHSLLKMLLQKDATKRLGSGTKGNLEIKDHKWFKPINWRKLDAREVQPSFRPEVAGKHCVANFEKRWTDMPIVDSPAASPNGVNPFKDFSYVRSAASFLQRNSPAF 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0270 496 SUPERFAMILY Protein kinase-like (PK-like) 164 485 IPR011009 -
Lele41g0270 496 CDD STKc_AGC 173 423 IPR045270 GO:0004674|GO:0005524
Lele41g0270 496 SMART serkin_6 167 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0270 496 Pfam Protein kinase domain 167 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0270 496 Gene3D Transferase(Phosphotransferase) domain 1 247 442 - -
Lele41g0270 496 ProSiteProfiles Protein kinase domain profile. 167 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0270 496 Gene3D Phosphorylase Kinase; domain 1 164 464 - -
Lele41g0270 496 SMART pkinase_C_6 424 483 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele41g0270 496 ProSitePatterns Serine/Threonine protein kinases active-site signature. 286 298 IPR008271 GO:0004672|GO:0006468
Lele41g0270 496 ProSiteProfiles AGC-kinase C-terminal domain profile. 424 491 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele41g0270 496 ProSitePatterns Protein kinases ATP-binding region signature. 173 196 IPR017441 GO:0005524
Lele41g0270 496 PANTHER RIBOSOMAL PROTEIN S6 KINASE 125 485 - -
Lele41g0270 496 Pfam Protein kinase C terminal domain 445 481 IPR017892 GO:0004674|GO:0005524|GO:0006468
Lele41g0270 496 FunFam Non-specific serine/threonine protein kinase 247 442 - -
Lele41g0270 496 FunFam Non-specific serine/threonine protein kinase 164 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0270 Lele-ChrLele41 2211227 2213687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0270 1 493 AGC Kinase Gene Family AT3G08720 66.801 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Lele41g0270 Pkinase 2.2e-75 CL0016