Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0266 ATGAGTTCTGATAAACCACTGCTTCCAGAATCAGATTGCTCTCAGGGGATTCATCGCCGTGAACGTAAATCAGGATCTCTCAGTCGCTATGTCTCCTTCCCATCTACCATTTTTGATGAAACTCAAAGTGGTAGTTTTGATGTGAAGGACGTAGACGTTGTATCTGCTGGAGACTCTAGTTTTCATAGTGCACTTGAACATTGCACTTCTTTGACAGAGAAGGACTCTCAATCAGTTGAATCTGAGTTTTGCCAGCGGCTACCTTTGGAATGCTCCACTCGAGAGAGGAGGCGCCTGACATCGTGGGGTGCAATGGAACAGCACGATATGAATAGCAATACTGTGCCATTTGAAATATCAGGTGCTCCATCTCGAGTGCAGGAAAAGAATAAATCACAGAGAATTCGTCACAGAAGTGTGCAATTTGAAGATAACCTACATGATGACAATTCGAGGTCAATATACATCAATGATGCCAAGAAGACAAATGACAAATATGAGTTCACGGGGAATGAGATTCGAACTAGTAGATACACAATTATCACCTTCCTGCCTAAGAATCTTTTCATTCAATTTCATCGGGTTGCTTACTTGTATTTCCTTGCTATTGCGGCTCTAAATCAGCTCCCTCCACTAGCTGTATTTGGTAGGACCGTGTCTCTTTTCCCCCTCTTGTTTGTTCTTTGTGTCACAGCTATTAAGGATGGTTATGAGGATTGGCGGAGGCACAGGTCAGACCGCAACGAGAACAACCGAGTGTCTCTGGTGCTTCAATCTGGTGATTTCCGACCAAAAAAATGGAAGAATATTGAAGTTGGTGAGGTTGTTAAAATCTTAGCTGATGAGACTATACCCGTTGACATGGTCTTGTTGGGGACAAGTGATCAAAGTGGGCTTGCCTACATTCAGACAATGAACTTGGATGGTGAATCAAATTTAAAGACGAGGTATGCTCGGCAGGAAATGGCTTCAGCAGTATCACCAGATTGTTGTGCTGTTTCTGGGATCATTAGATGTGAGCAACCGAACAGGAATATTTATGAATTCACAGCCAACATGGAGTGCAATGGGCATAGATTTTCCCTTAGCCAATCAAATATTGTTCTGCGTGGTTGCCAACTGAAGAACACAGATTGGATAATCGGTGTTGTGGTTTATGCGGGGCAGGAAACAAAGGCAATGTTGAACAGTGCAGCTTCCCCTTCGAAGAGAAGCAGACTGGAGGCATATATGAACAGAGAAACCCTTTGGTTGTCAATTTTTCTCTTTACTATGTGTTTGGTTGTGGCCGTTGGGATGGGTCTTTGGCTGATGCGTCATAAGGACCAGCTTGACACCTTGCCATACTACAGAAAAAGATTCTTCACAAGGGGCTTTGATAATGGAAAGAGATACAGATATTACGGGATACCAATGGAAATCTTTTTCTCATTTTTGAGCTCTATTATAGTTTTCCAGATAATGATACCCATATCTCTTTACATAACTATGGAGCTGGTTCGTTTGGGCCAGTCATATTTCATGATTGAGGATGGGGATATGTATGATGCCAACTCTGGATCAAGGTTTCAGTGTAGGTCATTAAATATCAATGATGATTTGGGTCAAATACGTTATGTATTTTCAGACAAGACAGGAACACTTACAGAAAATAAGATGGAATTTCAAAAAGCTAGTATACATGGAAGGAATTATGGGAGTTCATTACTTATGGGCGATAATACAATAGCAGCAGCAGCAGCAGTTAGTGGCAGAGGGAGATGGAAGCTCAAATCTGAAATTGCTGTTGATTCAGAACTCATAACACTGTTGCATACAGACTCAGATAGAGATGAAAGGATTGCTGCACATGAATTTTTCCTTACATTGGCTGCTTGTAATACTGTGATTCCTATCCGTAGTGGTGGAACAAGTGAGTCAAATGAGGGTGTAGAATGTATTGAATACCAGGGAGAATCTCCTGATGAACAAGCATTAGTTGCTGCAGCCTCTGCCTATGGATATACACTTTTTGAGCGGACATCAGGACATATAGTTATTGATGTCAATGGTGAGAAACTCAGGTTGGATGTATTGGGTCTGCACGAGTTTGATAGTGTTCGGAAAAGGATGTCTGTTGTTATTCGATTTCCTGACAATACGGTAAAGGTGTTAGTTAAAGGAGCTGATACTTCAATGTTTATCATCTTAGCTGATGAAATTGACAGCAGTGATAGTACACGGCATGCAACTCTGGGTCATTTAAATGAATATTCTTTGCAAGGTTTACGCACACTTGTAGTTGCTTCCAGGAATCTTTCAGATGCAGAACTTAAGCAGTGGCAGAGCATGTATGAAGAAGCAAGCACTTCATTAATTGATAGAGGTGCAAAACTACGCCAAACTGCAGCTCTAATAGAATGCAACTTAAAGCTACTTGGAGCAACTGGGATTGAGGACAAACTGCAAGAGGGTGTACCTGAAGCTATTGAGTCCTTGCGGCAAGCTGGAATTAAGGTCTGGGTTCTTACTGGTGATAAGCAAGAGACAGCAATTTCAATAGGTCTCTCCTGCAAACTTTTGACCTCAGATATGCAGATGATAATTATAAATGGCACATCGGAAAATGAATGCAGAAATCTTTTGGCTGATGCTAAAGCCAAATTTGGTATAAGATCTGTATGTAAAAGAAACCAGAATATGAGGCACAAAACCAATGATGGACGTGGTGATCTTGAGACTGCCAATAATACAAAGTCATTCGATGTGCCTAAATGTGATCTAAGGGAAGAAGGAACTAATGCTCCACTGGCGCTTGTAATTGATGGAAACAGTTTGGTTTACATCTTGGAGAAGGAACTGGAGTCAGAGCTTTTCGACCTTGTGACTTCTTGTAGAGTTGTGCTATGCTGTCGTGTTGCACCCCTGCAGAAAGCAGGAATTGTTGATTTGATTAAGAGCCGCACTGATGATATGACACTGGCTATTGGTGATGGGGCCAATGATGTGTCAATGATACAAATGGCAGATGTCGGTGTTGGAATATGTGGGCAGGAAGGGCGCCAAGCAGTGATGGCATCTGATTTTGCTATGGGACAGTTTCGGTTCTTGAAAAGATTGCTTCTGGTTCATGGACACTGGAATTATCAGCGTGTTGGCTATTTAGTTCTCTACAATTTCTACCGCAATGCTGTCTTTGTCTTGATGTTATTCTGGTATATATTATGCACTGCTTTTTCAACAACTTCTGCATTGACAGATTGGAGCAGTGTATTCTATTCTGTGATATACACATCAGTCCCTACTATTGTTGTTGGTATGCTGGACAAAGACTTGAGTCATAAGACACTCTTGCAGTATCCAAAACTGTATGGCGCAGGTCATCGGCATGAAGCTTACAATATGCATTTATTTTGGATCACGATGATTGACACGCTATGGCAGAGTCTTGTTCTCTTCTACATCCCCTTGTTCACCTATAAGGATAGCACAATTGATATATGGAGCATGGGCAGTTTGTGGACAATTGCAGTTGTTGTCCTTGTGAATGTACATTTGGCTATGGACATTAGGCAGTGGGTATTAATTACACACGTTGCTGTATGGGGATCAATAATCATCACATTTGGTTGCATGGTGGTATTGGATTCTTTTCCTGTCCTTCCCAACTACTGGACTTTTTATCATGTGGCCAAGTCCCCTACATATTGGGTCACAATTTTGCTTATAATTATTGTGGCAATGCTCCCTCGATTAGTCTGTAAAGTTGTTTATCAAGTATTTTGGCCCTCTGATATCCAGATAGCAAGAGAAGCTGAGATATTAACAAAACATCGTGATCATCTGAGGCCAAGGCAAGAAGTTTCTAGTCATCTGTTGAGCTGCAGGGGCGGAATGCATTGA 3882 0.4158 MSSDKPLLPESDCSQGIHRRERKSGSLSRYVSFPSTIFDETQSGSFDVKDVDVVSAGDSSFHSALEHCTSLTEKDSQSVESEFCQRLPLECSTRERRRLTSWGAMEQHDMNSNTVPFEISGAPSRVQEKNKSQRIRHRSVQFEDNLHDDNSRSIYINDAKKTNDKYEFTGNEIRTSRYTIITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRVSLVLQSGDFRPKKWKNIEVGEVVKILADETIPVDMVLLGTSDQSGLAYIQTMNLDGESNLKTRYARQEMASAVSPDCCAVSGIIRCEQPNRNIYEFTANMECNGHRFSLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMLNSAASPSKRSRLEAYMNRETLWLSIFLFTMCLVVAVGMGLWLMRHKDQLDTLPYYRKRFFTRGFDNGKRYRYYGIPMEIFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDGDMYDANSGSRFQCRSLNINDDLGQIRYVFSDKTGTLTENKMEFQKASIHGRNYGSSLLMGDNTIAAAAAVSGRGRWKLKSEIAVDSELITLLHTDSDRDERIAAHEFFLTLAACNTVIPIRSGGTSESNEGVECIEYQGESPDEQALVAAASAYGYTLFERTSGHIVIDVNGEKLRLDVLGLHEFDSVRKRMSVVIRFPDNTVKVLVKGADTSMFIILADEIDSSDSTRHATLGHLNEYSLQGLRTLVVASRNLSDAELKQWQSMYEEASTSLIDRGAKLRQTAALIECNLKLLGATGIEDKLQEGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLTSDMQMIIINGTSENECRNLLADAKAKFGIRSVCKRNQNMRHKTNDGRGDLETANNTKSFDVPKCDLREEGTNAPLALVIDGNSLVYILEKELESELFDLVTSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSVPTIVVGMLDKDLSHKTLLQYPKLYGAGHRHEAYNMHLFWITMIDTLWQSLVLFYIPLFTYKDSTIDIWSMGSLWTIAVVVLVNVHLAMDIRQWVLITHVAVWGSIIITFGCMVVLDSFPVLPNYWTFYHVAKSPTYWVTILLIIIVAMLPRLVCKVVYQVFWPSDIQIAREAEILTKHRDHLRPRQEVSSHLLSCRGGMH 1293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0266 1293 CDD P-type_ATPase_APLT_Dnf-like 170 1149 - -
Lele41g0266 1293 Pfam Phospholipid-translocating ATPase N-terminal 154 219 IPR032631 -
Lele41g0266 1293 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 960 1075 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele41g0266 1293 MobiDBLite consensus disorder prediction 1 28 - -
Lele41g0266 1293 SUPERFAMILY Calcium ATPase, transmembrane domain M 168 1256 IPR023298 -
Lele41g0266 1293 ProSitePatterns E1-E2 ATPases phosphorylation site. 543 549 IPR018303 -
Lele41g0266 1293 Pfam Phospholipid-translocating P-type ATPase C-terminal 1017 1257 IPR032630 -
Lele41g0266 1293 FunFam Phospholipid-transporting ATPase 649 793 - -
Lele41g0266 1293 Gene3D - 645 783 IPR023299 GO:0000166
Lele41g0266 1293 SFLD p-type atpase 525 1040 IPR044492 -
Lele41g0266 1293 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 131 1267 - -
Lele41g0266 1293 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 168 1264 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lele41g0266 1293 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 547 819 IPR023299 GO:0000166
Lele41g0266 1293 Pfam E1-E2 ATPase 254 499 - -
Lele41g0266 1293 Gene3D - 227 397 - -
Lele41g0266 1293 Pfam Cation transport ATPase (P-type) 652 725 - -
Lele41g0266 1293 PRINTS P-type cation-transporting ATPase superfamily signature 541 555 - -
Lele41g0266 1293 PRINTS P-type cation-transporting ATPase superfamily signature 989 1008 - -
Lele41g0266 1293 SUPERFAMILY HAD-like 536 1035 IPR036412 -
Lele41g0266 1293 Gene3D - 803 1029 IPR023214 -
Lele41g0266 1293 SUPERFAMILY Calcium ATPase, transduction domain A 251 393 IPR008250 -
Lele41g0266 1293 FunFam Phospholipid-transporting ATPase 802 1029 - -
Lele41g0266 1293 SFLD Haloacid Dehalogenase 525 1040 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0266 Lele-ChrLele41 2184581 2193944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0266 132 1273 Primary Pumps ATPases AT5G04930 57.304 0.0 1329