Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0264 ATGCATGACATAAGCCTGGTGACGTCATTCTCCTTCATATCCCCTAGAGCATCCCAACTTGCCAGGCAAGAAACCCCACGCCCCTTGGTGGTCCACACGTACATGGAATGGCGTGGAGTCCTAGGAATTAATCTAGCGTGGAATTTTCCTACGTGCTTCACTCTGATCGTATATAAAGGTTTTGTATTATTGAGTGGTTTTGTTATGGAGATTCTGGCAATGAAGGAGCTAGAGAGAGGGCGCGAGTTTGCGAACCAGCTTAGAGGACTGATGTTTAGGTCTGGGGATGAAGAAGATAAGGCCTTAACGACGTCGTCTGCTGAGGATCTTGCGGCCAAAGTGTTGGATTCTTTCCCCAACGCACACTCTCTCTTCAACAATCATCATCATGTTCCTGCAGATTCCTCCACTTCTTCCTTCTCTCACTTTCCTGCTAGCTTTGATGAATCTCACGAGAGCCCCAAGAGCTCTAAGAGACGAAGCCCCACCTCCGTTAAAGATCGCAGAATATGCTCTCCCAAGAAAAGATGCACTCACAAGCATGAGCAAGGATGCAAAGCAACAAAACAATTTCAGAAAATCCAAGACGACCCTCCTCTCTACAGAACAACCTATTTTGGGCACCACACTTGCACCAACCTCCTTAATCCTCACATGTTCTTTGATGATTTTCATGACCTTAATTCAACCTCTGCTTGTATCCTCAGATTCGACAATAATCAAAACAATCATAGTATTACCAACTTTGACCAACAAATCAAAACCCAACAACAAAACCATCTCTCTCTCTCGTCCTTCTCTTTATTTCCATCTGCTGGTTCTGTCGAAAACAAGGATCATCTCTGTCCCAACATCATGCAAGAGAAGAACATTAATTACATTAATGATAATATTACTGTTGTTGTTCCTCCATGTTCATCCGATGATTGCCTAATGTCTCCCTTTGGATATGGTGATGATGGAGTAATGGACGTGTTTAATTCTGCTGTATTATTTGATGATCCTCTTGTGTTTGAAGATCCCTTACTTGAAATGATGATTTTTGGAAGCTTAGCTAATTATTAG 1065 0.4272 MHDISLVTSFSFISPRASQLARQETPRPLVVHTYMEWRGVLGINLAWNFPTCFTLIVYKGFVLLSGFVMEILAMKELERGREFANQLRGLMFRSGDEEDKALTTSSAEDLAAKVLDSFPNAHSLFNNHHHVPADSSTSSFSHFPASFDESHESPKSSKRRSPTSVKDRRICSPKKRCTHKHEQGCKATKQFQKIQDDPPLYRTTYFGHHTCTNLLNPHMFFDDFHDLNSTSACILRFDNNQNNHSITNFDQQIKTQQQNHLSLSSFSLFPSAGSVENKDHLCPNIMQEKNINYINDNITVVVPPCSSDDCLMSPFGYGDDGVMDVFNSAVLFDDPLVFEDPLLEMMIFGSLANY 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0264 354 SUPERFAMILY WRKY DNA-binding domain 176 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele41g0264 354 Gene3D WRKY domain 150 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele41g0264 354 MobiDBLite consensus disorder prediction 148 171 - -
Lele41g0264 354 MobiDBLite consensus disorder prediction 145 172 - -
Lele41g0264 354 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 176 244 IPR044810 GO:0003700
Lele41g0264 354 Pfam WRKY DNA -binding domain 176 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele41g0264 354 SMART WRKY_cls 172 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0264 Lele-ChrLele41 2169864 2171623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0264 73 259 WRKY Transcription Factor Family AT1G66550 30.734 6.90e-16 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele41g0264 WRKY 1.4e-07 CL0274