Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0262 ATGCGTCCATTTAGGATAAGACTTCATCTGTTCTTTCGGTATTGTGGTGTAGATGATGGCCTGCTTCATTATATGTTGTTGTTGATGAAGTTGATGACTGTGATGGGGTTTGGGATTCATGGCGGCCGTCATCTCTGTGGACACGATGAAGGAAAAGTTCTCGTCTTTTGGAAAATTGTTAGCTTAGTTATTGCGAAGGATGACAATGGGATTTCAAAGGGTTTTGGCTTCGTGAACTATGATAACCTAGATGATGCCAGACTGGCAATGGAAGGAATGAATGGATCACAACTTGGTTCAAAGATTCTATACGTAGCCAGAGCACAAAAGAAGGCCGAACATGAGCTTATTTTGCACCATCAGTTTCAGGAGAAACGCAAGGAACAAATCTTAAAATACAAGATTCATGATGTAAGTGATGAAGAACTATGGAATCTTTTTCGTGCATGTGGCTCAATAACATCTGCAGTAGTTATGCGAGATGGCAAAGGTATAAGCAAGGGGTTTGGTTTCGTCTGCTTCTCCAACCCTGAGGAGGCTAATAAAGCTGTGAACACCTTTCATGGATGTATGTTTCATCGCAAACCATTACATGTTGCTATTGCTCAAAGAAAGGAGGATAGGCAAGCACAATTGCAGATTCAACATGCACAGCGAATTGCAGGACTATCTGGACCTTCAATAGCTGTTATTCCTGGCGGATATTCTCCTTATTATTATGCAGCTACCAGGGCCGTTTCACGGGTTCCTTCTCGACCTAGCATAATGTATCAACCTTTGGGGTTGACATAG 792 0.4217 MRPFRIRLHLFFRYCGVDDGLLHYMLLLMKLMTVMGFGIHGGRHLCGHDEGKVLVFWKIVSLVIAKDDNGISKGFGFVNYDNLDDARLAMEGMNGSQLGSKILYVARAQKKAEHELILHHQFQEKRKEQILKYKIHDVSDEELWNLFRACGSITSAVVMRDGKGISKGFGFVCFSNPEEANKAVNTFHGCMFHRKPLHVAIAQRKEDRQAQLQIQHAQRIAGLSGPSIAVIPGGYSPYYYAATRAVSRVPSRPSIMYQPLGLT 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0262 263 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 58 102 IPR000504 GO:0003723
Lele41g0262 263 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 137 198 IPR000504 GO:0003723
Lele41g0262 263 Gene3D - 135 221 IPR012677 -
Lele41g0262 263 Gene3D - 52 130 IPR012677 -
Lele41g0262 263 SUPERFAMILY RNA-binding domain, RBD 137 219 IPR035979 GO:0003676
Lele41g0262 263 SMART rrm1_1 129 200 IPR000504 GO:0003723
Lele41g0262 263 SMART rrm1_1 31 106 IPR000504 GO:0003723
Lele41g0262 263 PANTHER OS02G0815200 PROTEIN 63 205 - -
Lele41g0262 263 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 131 204 IPR000504 GO:0003723
Lele41g0262 263 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 55 110 IPR000504 GO:0003723
Lele41g0262 263 SUPERFAMILY RNA-binding domain, RBD 57 114 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0262 Lele-ChrLele41 2152678 2154268 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0262 52 262 Eukaryotic Initiation Factors Gene Family AT2G36660 52.489 6.73e-67 216