Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0253 ATGGAAAAGCTTGATGGATCTGGTACATCAAGAGCTGAAATTGAAAGTGAACTACAATGCTCATTGGTTTCTAACCAATTAAAAGGAAGCAGTGTTGAGAATGTGAGAGGGGTGCGAGTAGGGGATTATGCAGAGAATGATGGGCCTAGGAGTTGGCTCCAACCTCATAATGGTCCTACAAATGGGCCTTCTATGCGATTAAAACAAGAAGTTATGCCTTTTATGGGGGAACTCGGAAGCACTTTAATATCACAATTACATCCAGAGTCTAATGGGTCATCTAAGGCTGTCAAAGTTGACAACTGCAAGACAGATGTAGAAATGAGAGATATGTATGAATCGTTTGCTCAAACAAATTTAAGTATGACTCTTGGCGCACCTTTAGGGAATTCAAACTCCTCTCGTAATGATGTTTTTTATGAGAGGGAGCATAGTAAGACATCATCTTCAGCATTACCAGGGCCCAGATCTCGCCATCTCTTACCCAAGCCCCCTAGGTCAACCCTCACCACAGGTTTGGAGGCAAATGCAGGGATGGTATCTCAAATTCGTGTAGCCAGGCCGCCTGCTGAAGGACGGGGAAGGAATCAGTTACTTCCCCGTTATTGGCCTAGGATCACTGATCAAGAGTTGCAGCAAATCTCTGGAGATTCAAATTCAATCATTGTGCCATTGTTTGAAAAGACGCTTAGTGCAAGTGATGCTGGTCGAATTGGTCGCTTGGTTCTTCCAAAGGCTTGTGCTGAATTAGAACTGAATGAGGAAGTTATTTTGCAGACATATTTTCCTCCTATCTCTCAGCCAGAGGGCCTTCCCCTACGAATCCAAGATGTGAAAGGAAAAGAATGGGTATTCCAGTTTAGATTCTGGCCAAACAATAACAGCAGAATGTATGTTCTAGAAGGGGTAACTCCCTGCATTCAGTCTATGCAGTTGCAAGCTGGGGATACTGTGACATTTAGTCGTATGGACCCTGAGGGAAAACTTATAATGGGGTTTCGGAAGGCTTCAAATTCTGCTGTTGTACAGGAATCTCATCCGTCTAATATTCCCAATGGCAATCGTTCAAGTGAAACTTCCTATCCTGGTGTTTATGAGAATTTACCTGTATTAAGTGGCTACTCCGGCCTTCTTCAGTCATTAAAAGGAAGTTCAGAACCCCACCTAAATGCACTATCTAAAAAATGGAATCCAGCTTGTGGGGACATGAATTGGCATAATATTGAGATGCCTGAAGGAAGGAAAAGAGAAGGATTGCTTCTGCCACCATCGCCGGTTCCAGAGAAGAAAAAGACTCGTAATATTGGGCCAAAAAGCAAGAGACTGCTTATTGACAGCCAGGATGCACTGGAGCTGAAGCTAACCTGGGAAGATGCTCAGGATTTGCTGCGTCCACCACCAGCTGTTAAGCCGAGCATTGTCATGATTGAAGATCATGAACCTCCTATCTTTGGGAAGAGAAGTATATTTGTAGCCCGGTCAACTGGGAGTTCATGTTCTGCCCCCAGTGAGCTCACCCCAAGGGAACTAGATAATCTTCTGAGATTAGACAAGGAATTCAAGAAACAAAGAATGGCGGCTAGCCCCAGGCTGTCCCTGGAGCAGCATGAATCTTCTGGACTGGATGCTTTGGCTAATGCTGCAATACTTGGAGACGATGCAGGTGACTCTAGCAGGACACCAGTTGCTACCACTACAAAACACCCTCGGCATAGACCCGGATGCTCCTGCATTGTCTGCATCCAGCCACCCAGTGGAAAGGGAAAACACAAACCTACATGCACTTGCAATGTATGCATGACAGTTAAACGTCGGTTTAAAACCCTGATGATGCGAAAGAAGAAACGTCAATCTGAACGTGAAGCTGAGATTGCTCAGAGAAATCAGCAGTCATGTGGGCCTAGGGATGAATCAGAAGTAGAAAGCACTTCTAGAAACTTAACTCCAGCTGATGGTTCTGAGACTGAAGCAACTCAAGCAAGGGTACCAAATGAGTTGGACTTAAGAAGTCAAACTGATGTGGCCGAAACTAGCAAGGGGCAGTTAGACTTGAACTGTGATCCCGATCGAAATGACACGCAAGGTGGCTCAAACAGTGTCAGCATGATGAGTCTACTTCAAGAAGCAAGTCTCCCTTTGGAGACATATCTGAAGCAAAATTGTCGTACTAGCTTGGTATCAGAGCAACAACAAGCAAATTCACCTTCCAATGTGCAGGCGCAGGCCACAAACAACGAGGGCGAAGGAAGACACGACGAGGATTGTTGCAATGCTTCTGATGTTAAGGAGCAAGAAAGCAGTCATGAAGAGAACAGTGGTCAAGACAAAAGCGAAAACAAACCACCTTCTTGA 2352 0.4498 MEKLDGSGTSRAEIESELQCSLVSNQLKGSSVENVRGVRVGDYAENDGPRSWLQPHNGPTNGPSMRLKQEVMPFMGELGSTLISQLHPESNGSSKAVKVDNCKTDVEMRDMYESFAQTNLSMTLGAPLGNSNSSRNDVFYEREHSKTSSSALPGPRSRHLLPKPPRSTLTTGLEANAGMVSQIRVARPPAEGRGRNQLLPRYWPRITDQELQQISGDSNSIIVPLFEKTLSASDAGRIGRLVLPKACAELELNEEVILQTYFPPISQPEGLPLRIQDVKGKEWVFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRMDPEGKLIMGFRKASNSAVVQESHPSNIPNGNRSSETSYPGVYENLPVLSGYSGLLQSLKGSSEPHLNALSKKWNPACGDMNWHNIEMPEGRKREGLLLPPSPVPEKKKTRNIGPKSKRLLIDSQDALELKLTWEDAQDLLRPPPAVKPSIVMIEDHEPPIFGKRSIFVARSTGSSCSAPSELTPRELDNLLRLDKEFKKQRMAASPRLSLEQHESSGLDALANAAILGDDAGDSSRTPVATTTKHPRHRPGCSCIVCIQPPSGKGKHKPTCTCNVCMTVKRRFKTLMMRKKKRQSEREAEIAQRNQQSCGPRDESEVESTSRNLTPADGSETEATQARVPNELDLRSQTDVAETSKGQLDLNCDPDRNDTQGGSNSVSMMSLLQEASLPLETYLKQNCRTSLVSEQQQANSPSNVQAQATNNEGEGRHDEDCCNASDVKEQESSHEENSGQDKSENKPPS 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0253 783 MobiDBLite consensus disorder prediction 726 783 - -
Lele41g0253 783 MobiDBLite consensus disorder prediction 551 572 - -
Lele41g0253 783 MobiDBLite consensus disorder prediction 746 783 - -
Lele41g0253 783 Pfam B3 DNA binding domain 226 335 IPR003340 GO:0003677
Lele41g0253 783 Gene3D - 204 341 IPR015300 -
Lele41g0253 783 CDD B3_DNA 224 335 IPR003340 GO:0003677
Lele41g0253 783 SMART B3_2 226 337 IPR003340 GO:0003677
Lele41g0253 783 MobiDBLite consensus disorder prediction 140 171 - -
Lele41g0253 783 MobiDBLite consensus disorder prediction 624 679 - -
Lele41g0253 783 MobiDBLite consensus disorder prediction 726 745 - -
Lele41g0253 783 FunFam B3 domain-containing transcription repressor VAL1 204 341 - -
Lele41g0253 783 MobiDBLite consensus disorder prediction 416 435 - -
Lele41g0253 783 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 32 732 - -
Lele41g0253 783 SUPERFAMILY DNA-binding pseudobarrel domain 224 335 IPR015300 -
Lele41g0253 783 MobiDBLite consensus disorder prediction 610 699 - -
Lele41g0253 783 ProSiteProfiles B3 DNA-binding domain profile. 226 337 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0253 Lele-ChrLele41 2076744 2081187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0253 116 733 B3 DNA Binding Superfamily AT4G32010 50.301 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele41g0253 B3 1.4e-13 CL0405