Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0252 ATGAGGTGCTTCTCTGTCTTGAAAAGTAAGAAGAAAAAGTCTGAACAGATCATCCCTATAAAACATGTCAATCATAAAGAGCATGGAGTAGCAACCATATTGCCTGAACCTCGAACACATACTAGATCATTGCAGTCTGCACCTCCTAGTTTCAAGACAAGAGTGAAAACCATTCAACCTGTTAATAAAATCATGAAAAATAGAATACGAGCATTATCTGCTCCTTCAACTCTTGATGCAGCAGAGCAAGATGCTTTGGCGTCAGTTGAGTATGAGGAACAAGAAGAGTCCAAACACCGAGCTGGATTGATGAAGGAGCAGCGTGTATCCACTTCACAACCCTTACCTCTCCCATCTCCTCAGGTTGGTGGTGCATTGAAGGCTACCGGTAGCTTTAAGTTAGGGACAGCTACTGGTCCTCTACAGGCTTCTGGTCCTCTACAGGCTTCTGGTCCTCTATCTGCTTCTGGACCTTTGCCACTGCCACCAACTGGTTCCCTACGAAACTTCCCATTTGAGGAAATTTCTGCTGCTTGCCACAATTTCTCTTCAGACCGATTCATGTCAGAAAGTCTTTCTTCTACCATGTATAAAGCTTCCTTTGGTGATGATGCTTCTAGTTCTAGTTCAAAAACTTTTGAAGCCACTATCACTCGCCTTCACCCTTCTACTCAGGCCTTGAAGGAGTTCATAAATGAGGTTAACATTATTGCATCTTTGCAACATCCAAACCTCTGCAAATTGCTAGGTTACCATGCTCGTGAGGGTTCAGAACAGAGAATGTTGGTTTATGAAAGGCTTTTCCATGGAAGCTTGGACCGCTTGTTGTATGGGAGATCTGATGGCCCACCACTTGATTGGAATACAAGAATGAAAATTTCTTTGGGTGCTGCCCAAGGTCTTACTTTCTTGCATGAAGAAGGGCCCTTCCAGGCAATGTATAATGAGTTTTCTACAGCCAACATACAGATTGACAAAGATTTCAGTGCAAAGCTTTCAGGATATGGTTGTGTTGGACATATTCCTGAAGAAGAGATTCCAAGCAGTTCACCTGCGGTGGGAAACCTATCAGTGGAGACACTGGAAAAACGATTGCTAACTCCAAAGAGCAATGTTTGGAGCTTTGGCATTTTTCTTCTAGAACTACTGACTGGAAGAAAGAATCTGGATAGTCGTCACCCCAAGGAAGAGAGGAATTTAGTTAAGTGGAGTTGGCCTTTCCTAGCCGATGATTGTCGACTGTCCTTGATCATGGATCCTCAACTGAAAGGTCGGTTTCCTTCCAAAGCAGCGAGGACAATAGCGGATATTGCACTAAGATGCCTTCAGAAGGAGCCATCAGAAAGACCCACCATGAGAATTGTTGTTGAGCATCTGAAAATGGTACAGGATATGAAATACTCTCTTCGGTTTCCTCTGCAAGAGCCTGCTGCAATTTCTGGAAAACAGATGTCAAGATCACCGAGTCTTAATGGCATCATCTGTCCCCAGCCTAGAACGAGTTTCTCTCCATCACCACCACCATTGCCTTCAGGAACACAACCATCTGGTTCACCTCCAAGATGGTCTGGTGGGCCTAACTTGCTTCCCTTTCGAGGGTGTTCCTCCATGCTTTCTTTGGATGAGCTTGATCGGCAGTTAAGCCAGAAGTCGTCTTCCTCGGCGTCTAGGAGGGCTGGTGTTGTAGGATATTGA 1695 0.4472 MRCFSVLKSKKKKSEQIIPIKHVNHKEHGVATILPEPRTHTRSLQSAPPSFKTRVKTIQPVNKIMKNRIRALSAPSTLDAAEQDALASVEYEEQEESKHRAGLMKEQRVSTSQPLPLPSPQVGGALKATGSFKLGTATGPLQASGPLQASGPLSASGPLPLPPTGSLRNFPFEEISAACHNFSSDRFMSESLSSTMYKASFGDDASSSSSKTFEATITRLHPSTQALKEFINEVNIIASLQHPNLCKLLGYHAREGSEQRMLVYERLFHGSLDRLLYGRSDGPPLDWNTRMKISLGAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEIPSSSPAVGNLSVETLEKRLLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSWPFLADDCRLSLIMDPQLKGRFPSKAARTIADIALRCLQKEPSERPTMRIVVEHLKMVQDMKYSLRFPLQEPAAISGKQMSRSPSLNGIICPQPRTSFSPSPPPLPSGTQPSGSPPRWSGGPNLLPFRGCSSMLSLDELDRQLSQKSSSSASRRAGVVGY 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0252 564 Pfam Protein tyrosine and serine/threonine kinase 213 459 IPR001245 GO:0004672|GO:0006468
Lele41g0252 564 MobiDBLite consensus disorder prediction 135 151 - -
Lele41g0252 564 ProSiteProfiles Protein kinase domain profile. 182 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0252 564 MobiDBLite consensus disorder prediction 500 515 - -
Lele41g0252 564 SUPERFAMILY Protein kinase-like (PK-like) 160 472 IPR011009 -
Lele41g0252 564 MobiDBLite consensus disorder prediction 91 105 - -
Lele41g0252 564 MobiDBLite consensus disorder prediction 545 564 - -
Lele41g0252 564 PANTHER OS01G0588500 PROTEIN-RELATED 104 463 - -
Lele41g0252 564 MobiDBLite consensus disorder prediction 480 530 - -
Lele41g0252 564 MobiDBLite consensus disorder prediction 480 499 - -
Lele41g0252 564 Gene3D Transferase(Phosphotransferase) domain 1 268 471 - -
Lele41g0252 564 Gene3D Phosphorylase Kinase; domain 1 163 265 - -
Lele41g0252 564 MobiDBLite consensus disorder prediction 88 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0252 Lele-ChrLele41 2073120 2075831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0252 154 463 Receptor kinase-like Gene Family AT4G02010 37.460 1.05e-54 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Lele41g0252 PK_Tyr_Ser-Thr 3.2e-24 CL0016