Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0244 ATGAACAAGATGAGATTAGGAGGCATGGGGGTGGCTCAGATGCATTATGTGGAAACAGACCCATCTGGAAGATATGGACGATTCAGGGATGTACTGGGGAAAGGGGCGATGAAGATAGTGTACAGAGCATTTGATGAGGTGTTGGGAATAGAAGTGGCCTGGAACCAAGTGAAGCTTGGAGATGTGTTTCATTCCCCAGATGAACTGCAACGCCTTTATTCAGAAGTTCATCTTCTCAAGAACCTTGATCATCCCTCTATCATGACCTTCCATGCTTCATGGATCGATGTCCACCACAGAACCTTCAACTTCATCACCGAACTCTTCACCTCCGGCACGCTACGAGAGTATAGGAAGAAGTACTGTAGAGTAGATATTCGAGCAGTGAAGAACTGGGCTCGTCAAGTTCTTAGTGGTTTGGAGTATTTGCACTGCCATGATCCTCCTGTAATACATAGAGACCTCAAGTGTGATAATATCTTCGTGAATGGCCATCTGGGGCAGGTCAAGATCGGCGATTTAGGCCTCGCCGCCATCCTCCGTGGCTCTCAACATGCCCACAGTGTCATAGGTACACCTGAATTCATGGCTCCAGAACTGTATGAAGAGGAATACGATGAACTTGTTGATATATACTCCTTTGGGATGTGTATGATAGAGATGCTTACTTCTGAGTTTCCTTACGGAGAGTGCTCAAACCCGGCACAAATATACAAGAAAGTCACTTCAGGGAAGCTACCAGATGCATTTTACAGAATCCAAGATTTGGAAGCTCAGAGATTCGTGGGAAAATGTTTGGCAAATGTGTCGAAGAGATTGCCGGCGAAGGAACTCTTGTTGGACCCGTTTTTAGCCATGGTCCAACTCGAATCACCACCACCCTTCCTGCCATCACCAAAGATTCAAACTCATTACAAGTCCAATTCCAATTCAGTAGTTGCCAGCAAGGTGCATTCTTCCATGGCTGATCAAACCAAGAGTACAAACATGACAATAACAGGGACAATGAATGAAGAAGATGACACAGTTTTCCTTAAAGTTCAAATATCAGACAAAAATGGGCATGTTAGGAACATATACTTCCCCTTTGACACCATAAATGACACTGCAATGGACGTTGCCATTGAGATGGTTAGGGAATTGGAAATAAACGACTTGGAGCCATTGGAGATTGCTCAAATGATAGAGGAAGAGATATTAGCTCTGGTTCCAACTTGGAAAGATTGGGGCACCACTTCTCAGTGTCCACGTCAGCACAGCTTTAGATATGAAGAAGAAGAAGAAGATGATATCAGCAACCACCATCCATTTTTCTCATCTTCTACTTCACGATCCTCCTCTCATGGTTCTCTCCCAATGCTCAGCTTCTCTAGCAAGACCCTCTTTGGTGGAAACAACAACCATTTCTCACTTCCTCAGGATTGGCTTCAAGATAATGATGGCTTTCTCGACGACACAAGCTCAGAAAGCTCCATGAATTCCTTCAAGTATGCTAACACGAATCACTGCGAGGCGAGCATGGAAGATAATGAGCATGATGCAAATTACAAGTGCTCAAGATTCTGTCCTGCACAAGAGATGGAAGCCAATTACAGTAATAAGCAGATGATGATCAGCAATCGAAGAACAACAGATTGCTGCCAGACATGCGGTGATCATCGGTCGGCGGGGAGCATGACGAGGATGCGGTCATATGTGGATGTGAGGAGCCAGCAGTTGCAGAGATCGTTAATGGAGGAGATCCATAAGAGAAGGATGTCCAAGACGGTAGGGGCCATTGAGAACATTGGCTTTCAGGATCCAACCGCCACATGGAGGTCTGGCTCTTAA 1830 0.453 MNKMRLGGMGVAQMHYVETDPSGRYGRFRDVLGKGAMKIVYRAFDEVLGIEVAWNQVKLGDVFHSPDELQRLYSEVHLLKNLDHPSIMTFHASWIDVHHRTFNFITELFTSGTLREYRKKYCRVDIRAVKNWARQVLSGLEYLHCHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQHAHSVIGTPEFMAPELYEEEYDELVDIYSFGMCMIEMLTSEFPYGECSNPAQIYKKVTSGKLPDAFYRIQDLEAQRFVGKCLANVSKRLPAKELLLDPFLAMVQLESPPPFLPSPKIQTHYKSNSNSVVASKVHSSMADQTKSTNMTITGTMNEEDDTVFLKVQISDKNGHVRNIYFPFDTINDTAMDVAIEMVRELEINDLEPLEIAQMIEEEILALVPTWKDWGTTSQCPRQHSFRYEEEEEDDISNHHPFFSSSTSRSSSHGSLPMLSFSSKTLFGGNNNHFSLPQDWLQDNDGFLDDTSSESSMNSFKYANTNHCEASMEDNEHDANYKCSRFCPAQEMEANYSNKQMMISNRRTTDCCQTCGDHRSAGSMTRMRSYVDVRSQQLQRSLMEEIHKRRMSKTVGAIENIGFQDPTATWRSGS 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0244 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Lele41g0244 609 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0244 609 FunFam probable serine/threonine-protein kinase WNK9 109 289 - -
Lele41g0244 609 MobiDBLite consensus disorder prediction 435 449 - -
Lele41g0244 609 CDD STKc_WNK 24 284 - -
Lele41g0244 609 SMART serkin_6 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0244 609 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 13 579 - -
Lele41g0244 609 Pfam Protein kinase domain 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0244 609 SUPERFAMILY Protein kinase-like (PK-like) 28 328 IPR011009 -
Lele41g0244 609 Gene3D Transferase(Phosphotransferase) domain 1 109 288 - -
Lele41g0244 609 FunFam Probable serine/threonine-protein kinase WNK1 11 107 - -
Lele41g0244 609 Gene3D Phosphorylase Kinase; domain 1 11 107 - -
Lele41g0244 609 MobiDBLite consensus disorder prediction 422 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0244 Lele-ChrLele41 1995408 1999833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0244 16 429 MAP Kinase Kinase Kinase AT3G51630 69.082 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lele41g0244 Pkinase 1.8e-45 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0244 41 1995408 1999833 Lele41g0244 41 1995408 1999833 ECH
Lele41g0244 41 1995408 1999833 Lele43g1123 43 19607391 19608551 hybridization
Lele41g0244 41 1995408 1999833 Lele44g1109 44 19731163 19733037 hybridization