Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0242 ATGGGGAATTTTAGGTTTAGGTTATCAGATATGATCCCTAATGGTTGGTTTTACAAGCTCAGGGATATGGGGAAGAGCAAGAACAAGACATCATTGGACATGAAGACGAAGAAGAAGGAATCTTTATCCTCATCGACTTCGACAACCTCAAAGACATCAAAACCAAAGCAACCCCACCAGAGAATTACCAGAAAGTCTTACTACTTTCCGAGGGAGCTTAATTATCATCAAACCGATAGAATCTACAACACTTCATCACCACCACCTTCCTCTAACCCCAAAGTTTCTGTTTCGGACACCAATTTCCCAGAAACACCCAGAAAATCCTCGTCCAAACAGAAGAGTCCTAAGAGAAGAACCACAGGAACTTCTCTGAAGCAGCTCGTGTCTTCCTCAGTTTCTTCTGGCTGTCACTGCCGAACCACCCCCGAATCCGCTTGGACCAAGTCGGATTCCCCACCGGACAACTCATCGTCTCCGTTTGACAGCTATGCTGATTCAGAATTCCCAGTGCCAGAGTTCAGAACAGACCGCGTCCTTCCCACTGAATCGTCATTTGATGATGATTGCAACAGCTGCAGGCTAGAATTTCACGAAAACGACATCGTTATCGACGTGGACAAGAATTTTATCGCAAGAAAAGATGATAAGCTCGATGGTTTGGATTCATTCTCCAAGCTGGAGCTACCTCCGATCATAACCAAGCCAACGAAATTGAAGAAAGAAACAAAAGTAACCAAACCAAGAAACAGAGGACGAACATTCGAAGAACCTCAAGAACAGGGGAATCTGAAAGTCAAGATTTTGAATAGAGAACCGAGGACGAACCAGGTTCGGAGATTCTCCGTCAGCTCGCCGGGAGTGAAGATTCGGGTGAATTCCCCGAGAATAAGTGGCCGGAGGATTCAGGGATACAGTGGCCGGAAAAGTGTGTCTTCATCGTCGACGACGAGGAGCTCCCGGAGAAGCCTCTCCGATAGCTTTGCGGTGGTGAAGGCGTCGTTAAACCCACAGAAAGACTTCAGAGAGTCAATGGTGGAGATGATTGTGGAGAACAATATCAGAGCATCAAAGGACTTAGAAGATCTTCTTGCTTGTTATCTCTCTCTGAATTCAGATGAGTATCACGACCTCATCATCAAAGTGTTCAAGCAGATATGGTTTGATTTGACTGACACCCATTAG 1185 0.4565 MGNFRFRLSDMIPNGWFYKLRDMGKSKNKTSLDMKTKKKESLSSSTSTTSKTSKPKQPHQRITRKSYYFPRELNYHQTDRIYNTSSPPPSSNPKVSVSDTNFPETPRKSSSKQKSPKRRTTGTSLKQLVSSSVSSGCHCRTTPESAWTKSDSPPDNSSSPFDSYADSEFPVPEFRTDRVLPTESSFDDDCNSCRLEFHENDIVIDVDKNFIARKDDKLDGLDSFSKLELPPIITKPTKLKKETKVTKPRNRGRTFEEPQEQGNLKVKILNREPRTNQVRRFSVSSPGVKIRVNSPRISGRRIQGYSGRKSVSSSSTTRSSRRSLSDSFAVVKASLNPQKDFRESMVEMIVENNIRASKDLEDLLACYLSLNSDEYHDLIIKVFKQIWFDLTDTH 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0242 394 MobiDBLite consensus disorder prediction 116 164 - -
Lele41g0242 394 MobiDBLite consensus disorder prediction 77 109 - -
Lele41g0242 394 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 328 391 IPR006458 -
Lele41g0242 394 MobiDBLite consensus disorder prediction 300 319 - -
Lele41g0242 394 ProSiteProfiles OVATE domain profile. 330 389 IPR006458 -
Lele41g0242 394 Pfam Transcriptional repressor, ovate 334 390 IPR006458 -
Lele41g0242 394 MobiDBLite consensus disorder prediction 23 168 - -
Lele41g0242 394 MobiDBLite consensus disorder prediction 23 40 - -
Lele41g0242 394 MobiDBLite consensus disorder prediction 41 56 - -
Lele41g0242 394 MobiDBLite consensus disorder prediction 240 260 - -
Lele41g0242 394 MobiDBLite consensus disorder prediction 305 319 - -
Lele41g0242 394 Pfam DNA-binding domain 1 41 IPR025830 GO:0003677
Lele41g0242 394 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 54 391 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0242 Lele-ChrLele41 1978176 1979360 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele41g0242 Ovate 2.3e-24 No_clan