Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0240 ATGTTCCAGGCTATTCGAGAAATCAACAGGAATATTAGCGATGAGGAAAGAGTAGAATCTACTCCTCCGACCAGAGAAGAGGAACCCGAGGGTATTCTGTTCGGAAAATACGAAATTCGCAGGCTTCTCGGTGTCGGGGGTTTCGCTAAGGTTTACGAAGCTTGTGATGTTGTTACGAAGCGGCTTGTGGCTATTAAGGTCGTGAGCAAGCGCAGGGTAGCGGAAGCCGGCCACACGGCGCAGATTCAGAGAGAAATAGCTATCATGCACCGGCTGAATCATCCCCACATCGTGAAACTCTACGAGGTCCTCGCCACAAAAACTAAGATTTACCTCGTTATGGAATGTGCACAAGGCGGCGAGCTCTACGACAGACTCCGTAATCACGGCCTCTTTGACGAAGATCACAGCCGTCGGTGTTTCCATCAGTTAATCTCAGCCGTCCAACATTGTCATTCTCACGGCGCATTTCACCGCGATTTGAAGCTTGATAACCTCCTGCTCGACGAGGACTTGAACATCAAGGTTTCGGACTTCGGGTTGAGCGCCACCATGGACCAGATCCGACCCGACGGCATGCTTCTTACTCTCTGTGGGACCCCTTCTTACTTGGCCCCCGAGATGCTCGCCAAGAAAGGCTACGACGGAGAGAAAGTCGATGTGTGGCAGTGTGGCGTCGTTTTGTACGGGCTCACCACCGGATTTCTGCCCTTCGACGGCCACAACGTCCCGACGCAGCTGAGGAGAATCTACCGTGGCCAGGTTCGCATACCCCGATGGGTCCAACCCGATTTGAGGCGGTTAATCAAACGGTTGCTGGACCCGAACCCGAAAACGAGGATCACCATCGATGAGATTCTGGAAGACCCGTGGTTCAGAAAAGGTTACAGAGAGATCAAAGTCGCTAAGAAGAATCCAGAATGGGAGGATGACGATAGAATCAAGTCGTTGAACGCCTTCCATTTGATATCATTCTCTTCGGGTTTGGACATGTCGGGCTTGTTCATTACCCACCCGGAACCGGAAATTTCGGGCAGTGTGGAACGCGTCGTTTCGAAGGAGACGCCGAAGAGGATCGTGGAGATGGTGGAGGCGGTGGTTGATCGGGACATAATGACGGTGACCAGAAAGGAGGACGGATGGGGAGTGAAGCTTGAGGGGGATAGTGGTAATTTCGTTGTATTGGTTGGTGTTTACCGGCTAATGGGTGAGCTGGTTGTGATTGAGGTGAAGAAGAAAGAAAAAGGCGATGAAATTGGCGTACAATTCTGGAAAGATAAATTGAGGCCTCGAATTTTAGAGTTAGAGCATAAACCGGAATAG 1323 0.511 MFQAIREINRNISDEERVESTPPTREEEPEGILFGKYEIRRLLGVGGFAKVYEACDVVTKRLVAIKVVSKRRVAEAGHTAQIQREIAIMHRLNHPHIVKLYEVLATKTKIYLVMECAQGGELYDRLRNHGLFDEDHSRRCFHQLISAVQHCHSHGAFHRDLKLDNLLLDEDLNIKVSDFGLSATMDQIRPDGMLLTLCGTPSYLAPEMLAKKGYDGEKVDVWQCGVVLYGLTTGFLPFDGHNVPTQLRRIYRGQVRIPRWVQPDLRRLIKRLLDPNPKTRITIDEILEDPWFRKGYREIKVAKKNPEWEDDDRIKSLNAFHLISFSSGLDMSGLFITHPEPEISGSVERVVSKETPKRIVEMVEAVVDRDIMTVTRKEDGWGVKLEGDSGNFVVLVGVYRLMGELVVIEVKKKEKGDEIGVQFWKDKLRPRILELEHKPE 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0240 440 ProSitePatterns Protein kinases ATP-binding region signature. 43 66 IPR017441 GO:0005524
Lele41g0240 440 Pfam Protein kinase domain 37 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0240 440 FunFam Aurora kinase A 31 120 - -
Lele41g0240 440 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 28 412 - -
Lele41g0240 440 SMART serkin_6 37 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0240 440 Pfam NAF domain 315 375 IPR004041 GO:0007165
Lele41g0240 440 CDD STKc_AMPK-like 36 291 - -
Lele41g0240 440 SUPERFAMILY Protein kinase-like (PK-like) 33 308 IPR011009 -
Lele41g0240 440 FunFam Maternal embryonic leucine zipper kinase 30 335 - -
Lele41g0240 440 Gene3D Kinase associated domain 1, KA1 316 436 - -
Lele41g0240 440 Gene3D Phosphorylase Kinase; domain 1 34 118 - -
Lele41g0240 440 Gene3D Transferase(Phosphotransferase) domain 1 119 315 - -
Lele41g0240 440 CDD CIPK_C 318 430 - -
Lele41g0240 440 ProSiteProfiles NAF domain profile. 312 336 IPR018451 GO:0007165
Lele41g0240 440 ProSiteProfiles Protein kinase domain profile. 37 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0240 Lele-ChrLele41 1954913 1956235 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0240 33 435 CBL-interacting serine-threonine protein kinases AT2G30360 50.243 2.35e-143 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele41g0240 Pkinase 3.7e-71 CL0016