Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0236 ATGCAACGGTATGAACTGGGGAGATTATTAGGCCAAGGAACCTTTGCAAAGGTCTATTATGCAAGGAACCTTGTTACTGGCATGAGTGTGGCCATTAAGGTGATTGACAAAGAGAAGATTTTGAAAGTTGGGATGATTGATCAAATTAAGAGGGAAATTTCAGTGATGAGACTTGTTAGACATCCACATGTGGTTGAGCTTTATGAGGTGATGGCCACTAAAACCAAGATTTACTTTGTCATGGAGTATGCAAAGGGTGGTGAACTCTTCCACAAGGTAGCCAAAGGAAAGCTGAAGGAGGATGTTGCCAGGAAATACTTTCAGCAACTGATCAGTGCTGTTGACTACTGCCACAGTAGAGGAGTGTGTCATCGGGATCTAAAACTAGAAAATCTGCTATTAGACGAAAATGGGAATTTGAAGGTTTCAGATTTTGGGTTAAGTGCTCTTGCTGACACGAAGCACCAGGATGGCTTACTCCATACTACATGTGGTACCCCAGCCTATGTTGCTCCAGAGGTGATAAACAGAAAAGGATATGATGGGGCCAAAGCTGATATATGTTCATGTGGGGTGATCTTGTATGTTTTATTGGCTGGTTATCTTCCATTCCACAATTCCAATCTGATGGAGATGTATACGAAGATTGGTAGGGGGGAGTTCAAATTTCCTAACTGGTTTGCACGGGATGTACGGCGGTTGTTGTCCAAAATCTTGGATCCGAATCCAAACACCCGGATATCAATGGCCAAAGTTATAGAAAATTCTTGGTTCAAAAATGGATTAGAAAATAATGTTACAGAGACCAAAGAGAAAGAACTAGCTCCTTTGGATACTGATGGTGTATTTGGAGCTTGTGAGAATAACAGTGGTCCTATTGCAGAGACAAAACAAAAACTCACCAAACCTTGCAACATGAATGCTTTTGATATCATTTCCTTGTCTGCAGGTTTTGACTTGTCTGGTCTGTTTGAGGAGACTGATCGCAAAAGAGAGGTGCGCTTTACATCAAACAAGCCTTCCGCAATTATCATTTCTAAGTTAGAAGAAATTTGTAAGCGCCTTCGACTGAAAGTGAAGAAGAAAGATGGAGGTTTGTTCAAGTTGGAGGGCTCCAAGGAAGGCAGAAAAGGCTCTTTGGGTATCGATGCCGAAATCTCTGAGATCACCCCACTCTTCCATATGGTGGAGCTTAAGAAGTCGAATGGCGATACACTGGAGTACCAGAAGCTTCTGAAAGAGGACATTAGACCAGCACTTAAAGACATAGTTTGGACCTGGCAAGGAGAACAACCTCAGCAACTCCAACAAGAAGCGTTGCTGACAGAGCAACAGCCTTCACATGCTGCCTAG 1353 0.4272 MQRYELGRLLGQGTFAKVYYARNLVTGMSVAIKVIDKEKILKVGMIDQIKREISVMRLVRHPHVVELYEVMATKTKIYFVMEYAKGGELFHKVAKGKLKEDVARKYFQQLISAVDYCHSRGVCHRDLKLENLLLDENGNLKVSDFGLSALADTKHQDGLLHTTCGTPAYVAPEVINRKGYDGAKADICSCGVILYVLLAGYLPFHNSNLMEMYTKIGRGEFKFPNWFARDVRRLLSKILDPNPNTRISMAKVIENSWFKNGLENNVTETKEKELAPLDTDGVFGACENNSGPIAETKQKLTKPCNMNAFDIISLSAGFDLSGLFEETDRKREVRFTSNKPSAIIISKLEEICKRLRLKVKKKDGGLFKLEGSKEGRKGSLGIDAEISEITPLFHMVELKKSNGDTLEYQKLLKEDIRPALKDIVWTWQGEQPQQLQQEALLTEQQPSHAA 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0236 450 FunFam Non-specific serine/threonine protein kinase 1 83 - -
Lele41g0236 450 FunFam Non-specific serine/threonine protein kinase 301 425 - -
Lele41g0236 450 FunFam Non-specific serine/threonine protein kinase 1 279 - -
Lele41g0236 450 SUPERFAMILY Protein kinase-like (PK-like) 2 272 IPR011009 -
Lele41g0236 450 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0236 450 CDD CIPK_C 307 421 - -
Lele41g0236 450 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lele41g0236 450 CDD STKc_SnRK3 3 257 - -
Lele41g0236 450 Gene3D Transferase(Phosphotransferase) domain 1 84 281 - -
Lele41g0236 450 Pfam Protein kinase domain 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0236 450 Pfam NAF domain 303 361 IPR004041 GO:0007165
Lele41g0236 450 Gene3D Kinase associated domain 1, KA1 301 426 - -
Lele41g0236 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 122 134 IPR008271 GO:0004672|GO:0006468
Lele41g0236 450 ProSiteProfiles NAF domain profile. 301 325 IPR018451 GO:0007165
Lele41g0236 450 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 2 422 - -
Lele41g0236 450 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0236 450 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0236 Lele-ChrLele41 1929362 1930714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0236 3 433 CBL-interacting serine-threonine protein kinases AT5G58380 67.640 0.0 621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele41g0236 Pkinase 1.9e-72 CL0016