Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0210 ATGGAGAGCAGTGCGGAGAAAGAGTCTAATAGTCGAGTGCCACTTTCGGATGTGGTAGCGGATTGTGTTAAGCGGTGGTTTAGGGACACGCTTAAGGAGGCCAAAGCAGGTGACATCAATATGCAAGTGCTGGTTGGTCAGATGTATTGCAGCGGTTATGGAGTTTCTAGAGATGCCCAGAAGGGAAGAATTTGGCTTACCAAGGCATCAAGGACTAGATCTTCAGTTTGGAAAGTTGGTGATAAGCGCCCAGGTTATAATGCGAGTGATTCTGATTCTGATGAATTGAAGGAAGATTCTTAA 303 0.4554 MESSAEKESNSRVPLSDVVADCVKRWFRDTLKEAKAGDINMQVLVGQMYCSGYGVSRDAQKGRIWLTKASRTRSSVWKVGDKRPGYNASDSDSDELKEDS 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0210 100 MobiDBLite consensus disorder prediction 79 100 - -
Lele41g0210 100 Gene3D Tetratricopeptide repeat domain 7 86 IPR011990 GO:0005515
Lele41g0210 100 PANTHER EXPRESSED PROTEIN 1 99 - -
Lele41g0210 100 SUPERFAMILY HCP-like 32 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0210 Lele-ChrLele41 1689072 1690052 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0210 41 1689072 1690052 Lele37g1385 37 22624776 22626608 CCT
Lele41g0210 41 1689072 1690052 Lele38g1260 38 23397903 23401980 CCT
Lele41g0210 41 1689072 1690052 Lele40g1202 40 21883268 21887771 CCT
Lele37g1423 37 22907997 22920727 Lele41g0210 41 1689072 1690052 CCT
Lele41g0210 41 1689072 1690052 Lele41g0210 41 1689072 1690052 ECH
Lele41g0210 41 1689072 1690052 Lele43g1152 43 19902263 19903192 hybridization
Lele41g0210 41 1689072 1690052 Lele44g1143 44 20054743 20055650 hybridization