Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0207 ATGACGACCTCCTTCACAGAACTCCTTTCCATGGATGATCATCTCTGGCCTTCTTCTTCTTCTGAAATCCCTAAATTCAAGTCAACCCCACCTCCTTCCTTGCCCCTTTCTCCCTCCCCTCTCTCTCCTTCTTCTTACTTGGCTTTCTCTTCTGGCTTTAGCCCTACCCAGTTCTTGAGCTCTCCCTTGTTTCTCTCATCCCCAAATGTTCTTCCTTCTACTGAGACGTTTCAGAACAAGGAGGAGGAGCAGAAACCATTCTCTGAGTTCTCCTTCCAAACCCAATCGAACAAGCCGTCTTATCTTGTGCAGCAGGAACCACTGAAACAAGAACCATCATGGAATGAGAAGGCAGCTACAAAATCTGAATATCCAACGACTCAGAGCTTCTCCTCAGAACCACAGATGCAAAGCAATTTGGCTCCTGCTTCTGGTTATACTAATAACTACGCGAATTCGTCCCAGTCCATAAGAGAGCAGAAGAGGTCAGATGATGGGTACAACTGGAGAAAATATGGACAGAAACAGGTGAAGGCGAGCGAAAATCCTCGGAGTTATTACAAGTGCACGCATCCGAGTTGCAACATGAAGAAGAAGGTTGAAAGGGCTCTGGATGGACAAGTTACTGAGATAGTATATAAGGGAACCCATAACCATCCCAAGCCTCAGTCCACTAGAAGATCTAGTTCTCAATCAATTCAACCTTCTTCCTCTTGTACCAATTCCGGGATTTCTGATCAATCCGCGGTGACCCTAGGGAATCTACAAATGGATAGGGCCTCTTTCCAAGAAGATTCTTCTCTCTCTGTTGGAGAAGATGACTTTGAGCACACGTCTCAAACCTGTTACTCAGGGGGTGATGACAATGACTTTGGCCCTGATGCCAAAAGATGGAAAGGAGAGAATGAAATTGATGGCTATGCCTCCTCCGGGAATAGAACTGTGAGGGAACCAAGAGTCGTAGTTCAAACTACAAGTGAAATTGATATTCTTGATGATGGCTATAGATGGAGGAAATATGGTCAGAAAGTAGTTAAAGGAAACCCAAACCCAAGGAGTTACTACAAGTGCACAGCTCCAGGCTGTTCGGTGAGGAAACACATCGAGCGAGCTGCTAATGATATGAAAGCTGTGATCACAACGTACGAAGGGAAACACAACCACGATGTTCCTGCAGCACGAGGGAGTGGGAGTTATAACCTGAACGCAGCTTCTCTGAACAGCAACAACATTGCCCCACCTATAAGGCCATCGGCGTCTTCAGCGTTGACCAGCTATTCTGGCAAATCAAGTTTCACAAACTCGCTTAATAACCCAAGCCAGCCAACATCTGCTGCAAGTCAAGAACCTTTTCTATTTGACATGTTGCAGAGCCCTGCGAGTTTTGCATACACTGATTTCGTTACATCAATGGGATCGTATAACCCTGATGCATAA 1437 0.4572 MTTSFTELLSMDDHLWPSSSSEIPKFKSTPPPSLPLSPSPLSPSSYLAFSSGFSPTQFLSSPLFLSSPNVLPSTETFQNKEEEQKPFSEFSFQTQSNKPSYLVQQEPLKQEPSWNEKAATKSEYPTTQSFSSEPQMQSNLAPASGYTNNYANSSQSIREQKRSDDGYNWRKYGQKQVKASENPRSYYKCTHPSCNMKKKVERALDGQVTEIVYKGTHNHPKPQSTRRSSSQSIQPSSSCTNSGISDQSAVTLGNLQMDRASFQEDSSLSVGEDDFEHTSQTCYSGGDDNDFGPDAKRWKGENEIDGYASSGNRTVREPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTAPGCSVRKHIERAANDMKAVITTYEGKHNHDVPAARGSGSYNLNAASLNSNNIAPPIRPSASSALTSYSGKSSFTNSLNNPSQPTSAASQEPFLFDMLQSPASFAYTDFVTSMGSYNPDA 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0207 478 FunFam WRKY transcription factor 152 223 - -
Lele41g0207 478 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 61 426 IPR044810 GO:0003700
Lele41g0207 478 SUPERFAMILY WRKY DNA-binding domain 159 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele41g0207 478 Gene3D WRKY domain 148 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele41g0207 478 MobiDBLite consensus disorder prediction 70 191 - -
Lele41g0207 478 MobiDBLite consensus disorder prediction 218 245 - -
Lele41g0207 478 Gene3D WRKY domain 318 384 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele41g0207 478 MobiDBLite consensus disorder prediction 215 245 - -
Lele41g0207 478 Pfam WRKY DNA -binding domain 164 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele41g0207 478 Pfam WRKY DNA -binding domain 332 388 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele41g0207 478 MobiDBLite consensus disorder prediction 263 286 - -
Lele41g0207 478 ProSiteProfiles WRKY domain profile. 326 391 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele41g0207 478 FunFam WRKY transcription factor 33 318 384 - -
Lele41g0207 478 ProSiteProfiles WRKY domain profile. 158 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele41g0207 478 SUPERFAMILY WRKY DNA-binding domain 323 391 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele41g0207 478 SMART WRKY_cls 163 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele41g0207 478 SMART WRKY_cls 331 390 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele41g0207 478 MobiDBLite consensus disorder prediction 263 290 - -
Lele41g0207 478 MobiDBLite consensus disorder prediction 17 42 - -
Lele41g0207 478 MobiDBLite consensus disorder prediction 88 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0207 Lele-ChrLele41 1660168 1662244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0207 22 457 WRKY Transcription Factor Family AT2G38470 49.231 4.62e-112 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele41g0207 WRKY 1.2e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0207 41 1660168 1662244 Lele41g0207 41 1660168 1662244 ECH
Lele41g0207 41 1660168 1662244 Lele43g1155 43 19937091 19939176 hybridization
Lele41g0207 41 1660168 1662244 Lele44g1145 44 20087917 20089996 hybridization