Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0206 ATGTCGAAGGTTCCCGATTCACCTACCAAGACGGATTTCGAGTCTTCTCCGGCCGACCAGACGCCGGTGTCGCCTTTACCGGATTTAGAGAAACAAACACAGCCACAGGGCGGAGTCGGCGGGATATTAAGGCGATGGAAGAGGGACGATTTGTTGAAGAGAGGCTCGTTGGTTTTAAGAGGGATTGCCCTGGTTTCCTCTCTGATCAGTTTCATTGTCATGGCCTCCAATAAACATGGCGATTGGAAAAATTTCGATAGATACGAGGAATATAGGTATGTTCTGGCAATATCGATTCTGTCGACACTGTACACCGGCGGCCAAGTGTTCCGGCAAGTTAAGGAAAACTTTACCGGAAAGAATTTTCTTCAGCCAAGAACAGCTTTGTTGTTGGAGTTCGTCGGAGATCAGATAATGGCGTATTTGTTGATATCATCGGCATCTTCAGCAGTTCCTTTGACAAACAGAATGAGGGAAGGATCTGACAATATATTCACGGACACTTCTGCTGCAGCCATCAGCTTCTCCTTCTTGGCCTTCTTTGCTGCAGCTGCTTCCTCCCTTCTTTCTGGCTACAAACTATCAACTCAATCCTATATCTGA 603 0.4677 MSKVPDSPTKTDFESSPADQTPVSPLPDLEKQTQPQGGVGGILRRWKRDDLLKRGSLVLRGIALVSSLISFIVMASNKHGDWKNFDRYEEYRYVLAISILSTLYTGGQVFRQVKENFTGKNFLQPRTALLLEFVGDQIMAYLLISSASSAVPLTNRMREGSDNIFTDTSAAAISFSFLAFFAAAASSLLSGYKLSTQSYI 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0206 200 MobiDBLite consensus disorder prediction 1 40 - -
Lele41g0206 200 Pfam Casparian strip membrane protein domain 52 182 IPR006702 -
Lele41g0206 200 MobiDBLite consensus disorder prediction 1 31 - -
Lele41g0206 200 PANTHER CASP-LIKE PROTEIN 4A4 26 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0206 Lele-ChrLele41 1656464 1659287 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0206 41 1656464 1659287 Lele37g1382 37 22615163 22617589 CCT
Lele41g0206 41 1656464 1659287 Lele39g0042 39 313153 318496 CCT
Lele41g0206 41 1656464 1659287 Lele40g1200 40 21877727 21879642 CCT
Lele41g0206 41 1656464 1659287 Lele41g0206 41 1656464 1659287 ECH
Lele41g0206 41 1656464 1659287 Lele43g1156 43 19940054 19942053 hybridization
Lele41g0206 41 1656464 1659287 Lele44g1146 44 20091450 20093554 hybridization