Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0203 ATGGGGAATTGTTGTAGTAACAATCTTCCTCGTCAGTATTCAATGGAACAAGAGGTGAATGAGACAGAATTTGAGCGGGGAGAGGATCAAAATTCCATTTCCACATATGGTGAAGGTGAAGGGCGAGTCAGGCTAAGAGGATACTCTAGGTTTGTGTCCATGTACACCCAGCAGGGAAGAAAAGGAGTCAATCAAGATGCAATGACAGTTTGGGAGGACTTCAATGGAGAAAAAGATACGATATTTTGTGGTGTGTTCGATGGTCACGGCCCTTTTGGGCACGTGGTTGCTCGATATGTACGCAAACATCTACCCTCAAAGCTTTCTGCAGCAATCAAAATGTCACAGCAAATGACCTGCATGTATAATAATGGTGCTGCAGCAGGTGAAAATCACCAAGCACGGTCCCTTGCTTCGTGGGAGAAAACCTTCTTGAAATCCTTCAACGACATGGATCAAGCCATTGCCCGGGACATAAACACCGACAGTTTTTACAGTGGTAGCAATGCTGTAACTGTCATCAAACAGGGTGACCAGCTGATAATTGGCAATTTGGGTGACTCTCGTGCGGTTCTTTGCACAAGAGGAGCTAGAGATCAACTCATTCCTGTTCAACTTACTGTTGACTTGAAACCAGATATTCCAAGTGAAACTGAAAGAATCCGTAGCTGTGAAGGCAGAGTTTTCGCTGAAGAAGAAGAGCCTGATGTGTACAGAATGTGGATGCCTGATGAAGACTGCCCTGGACTAGCTATGTCAAGAGCCTTTGGGGACTTTTGCTTAAAAGACTATGGTCTCATCTCAGCTCCCGATGTTTGGGATGCACTGACAAATGATGAAGTTATAGGAATAGTTTCTTCAGCACCAGGGAGGTCCAGAGCAGCAAGATTGTTGGTAAAGAGAGCTGTGGAGGCATGGAGCTATAAATTTCCTGGCGCCAAAGTTGATGATTGTGCAGCCATATGTCTGTTTCTGAATGACCCACCAGAATCTGGGGAAAATAGGCGACAAAGGAGGAAGAATTACTATGAATCTGCTAGAAATGAAGAAGACACCACAAGCTTAGATAGTTCAATGTCAAAGGATGAATGGGTAGCTCTTAAAGGGTTATCCAGAGCCAACTCTATATCCAAACTTACTGGTCTCATCAGAGAAGTGAGCAGAAGGCGTCCATCTGAGTTTCTTGAGGGTCCTCAAGTTCACTAG 1206 0.4469 MGNCCSNNLPRQYSMEQEVNETEFERGEDQNSISTYGEGEGRVRLRGYSRFVSMYTQQGRKGVNQDAMTVWEDFNGEKDTIFCGVFDGHGPFGHVVARYVRKHLPSKLSAAIKMSQQMTCMYNNGAAAGENHQARSLASWEKTFLKSFNDMDQAIARDINTDSFYSGSNAVTVIKQGDQLIIGNLGDSRAVLCTRGARDQLIPVQLTVDLKPDIPSETERIRSCEGRVFAEEEEPDVYRMWMPDEDCPGLAMSRAFGDFCLKDYGLISAPDVWDALTNDEVIGIVSSAPGRSRAARLLVKRAVEAWSYKFPGAKVDDCAAICLFLNDPPESGENRRQRRKNYYESARNEEDTTSLDSSMSKDEWVALKGLSRANSISKLTGLIREVSRRRPSEFLEGPQVH 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0203 401 MobiDBLite consensus disorder prediction 330 355 - -
Lele41g0203 401 SUPERFAMILY PP2C-like 45 329 IPR036457 -
Lele41g0203 401 Gene3D - 47 327 IPR036457 -
Lele41g0203 401 PANTHER PROTEIN PHOSPHATASE 38 323 - -
Lele41g0203 401 SMART PP2C_4 40 323 IPR001932 -
Lele41g0203 401 CDD PP2Cc 50 325 IPR001932 -
Lele41g0203 401 MobiDBLite consensus disorder prediction 331 355 - -
Lele41g0203 401 Pfam Protein phosphatase 2C 64 271 IPR001932 -
Lele41g0203 401 ProSiteProfiles PPM-type phosphatase domain profile. 51 325 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0203 Lele-ChrLele41 1635344 1637833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0203 1 338 PP2C-type Phosphatase Gene Family AT5G01700 48.248 2.56e-109 324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0203 41 1635344 1637833 Lele41g0203 41 1635344 1637833 ECH
Lele41g0203 41 1635344 1637833 Lele43g1158 43 19957785 19960300 hybridization
Lele41g0203 41 1635344 1637833 Lele44g1148 44 20110676 20113029 hybridization