Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0191 ATGAACACTCTTTGCTGCTTCTTCTTGTTACTGTTCCTTTTTCCTCTGCTCTCTCTCTCTCTTTCATCCGATGGGCTGGCACTTTTGTCTCTGCAATCCGCCATTGATCAACCTCCTGGCGCTTCAGCTTTCCCCGACTGGAATGATGGTGATTCGACTCCTTGTCAGTGGTCTGGCATCTCCTGTATGAACGTCTCCGGTTCCTCGGAGCCTCGCGTTGTCGGAATCACGCTTTCTGGTAAGAATCTCCGGGGGTATATTCCTTCTGAGCTCGGAAGCTTGGGGTATCTTCGCAGGCTCAATTTGCATAGCAACAATTTCTATGGTTTTATTCCTGTTCAGCTCTTCAATGCCACTTCACTGCACAGTCTTTTTCTCTACGGTAACAACCTCTCCGGTCCTTTGCCCCCTTCAATCTGCAACATGCCGCGGCTTCAAAACGTTGATCTATCCAATAACTCCATCTCGGGTAATATCCCTGGGGAGCTCAAGAATTGCAAGCAGTTGCAAAGACTGATTCTCGCTCGGAACAAGTTCTCCGGGGAGATACCTAAAGGTGTGTGGTCGGAACTGGATAATTTGGTTCAATTGGACCTTTCTGCGAACGAGCTGAACGGGTCGATTCCGGACGATATTGGCGAATTGAAATCTCTATCGGGTACGCTCAACCTTTCTTTTAATCACTTGTCTGGTAGAATTCCGAAATCCCTGGGGAATTTGCCAGTTGCGGTGAGCTTTGATCTTCGGAATAACAATCTAAGTGGCGAGATACCCCAAACGGGGTCATTCGCTAACCAGGGTCCTACCGCATTTCTGAACAATCCGCAGCTATGTGGATTTCCCCTCCAGAAATCTTGCGTTAATTCGAACCAGGGCTCCCCGGGGAGTCCAAGTTCATCTCGGGAGTCCGATAACCGTTCGACGAATGGCCTCAGTCCTGGTTTGATCATACTAATTTCAGCGGCTGACGCAGCTGCGGTTGCGGTAATTGGCCTTGTACTTGTGTACATTTATTGGAAAAAGAAGGACAATTCCAATGGATGTAGCTGCACAGGGAAGAGCAAGTTTGGTGGGAATGAGAAAGGGCATATTTGTTCTTTCCCATGTATCAATGGTCTAAAAAGTGATGACTCTGAAATAGAGGAACCTGAAAAGGCAGAGGATAGCAGAGGGGAAGGGGATTTGGTGGCCATTGATAAAGGTTTTAACTTCGAGCTGGATGAACTTCTCCGGGCTTCGGCTTACGTATTGGGAAAGAGTGGATTGGGGATTGTGTACAAAGTGGTTCTGGGAAATGGGGTTCCTGTGGCTGTTAGAAGACTCGGAGAGGGTGGTGAACAGAGGTACAAGGAGTTTGCGGCTGAGGTTCAGGCCATTGGGAAAGTGAAGCACCCTAACATTGTGAGGTTGAAAGCTTATTATTGGGCTCCCGACGAAAAGCTTCTGATCAGTGATTTCATATCCAATGGCAATCTGGCCACCGCTCTTCGAGGCAGAAATGGTCAGCCATCTCCGAATCTTTCATGGTCAACCAGGCTAAGAATTGCCAAAGGAACAACTAGGGGCTTGGCCTATCTCCATGAATGCAGTCCAAGAAAGTTCGTTCATGGTGACATAAAACCCTCTAACATTCTACTTGACAACGACTTTCACCCTTACATCTCTGACTTCGCTCTCAACCGCCTCATCACCATCACTGGAAATAACCCTTCCTCCGGTGGCTTCATGGGTGGAGCTATTCCGTACATGAATCCATCTCAAACAGAGAAACCCAACAATTACAAAGCCCCTGAAGCCAGAGTCCCTGGCTGCAGACCAACCCAGAAATGGGACGTCTATTCATTCGGAGTTGTATTACTTGAACTTCTTACAGGGAAATCTCCAGAGTCATCTCCCACAACATCAACTTCAGTGGAAGTTCCTGACTTAGTGAGGTGGGTGAAGAAAGGGTTTGAAGAAGAAAGTCCATTATCAGAAATGGTTGATCCATCGCTGCTCCAAGAAGTTCATGCCAAGAAAGAGGTTCTAGCTGTGTTCCATGTAGCACTAGCTTGCACTGAGGGAGACCCTGAGGTTCGGCCTAGAATGAAAACTGTCTCTGAAAATCTTGAAAGGATCGGAACATGA 2127 0.4763 MNTLCCFFLLLFLFPLLSLSLSSDGLALLSLQSAIDQPPGASAFPDWNDGDSTPCQWSGISCMNVSGSSEPRVVGITLSGKNLRGYIPSELGSLGYLRRLNLHSNNFYGFIPVQLFNATSLHSLFLYGNNLSGPLPPSICNMPRLQNVDLSNNSISGNIPGELKNCKQLQRLILARNKFSGEIPKGVWSELDNLVQLDLSANELNGSIPDDIGELKSLSGTLNLSFNHLSGRIPKSLGNLPVAVSFDLRNNNLSGEIPQTGSFANQGPTAFLNNPQLCGFPLQKSCVNSNQGSPGSPSSSRESDNRSTNGLSPGLIILISAADAAAVAVIGLVLVYIYWKKKDNSNGCSCTGKSKFGGNEKGHICSFPCINGLKSDDSEIEEPEKAEDSRGEGDLVAIDKGFNFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFAAEVQAIGKVKHPNIVRLKAYYWAPDEKLLISDFISNGNLATALRGRNGQPSPNLSWSTRLRIAKGTTRGLAYLHECSPRKFVHGDIKPSNILLDNDFHPYISDFALNRLITITGNNPSSGGFMGGAIPYMNPSQTEKPNNYKAPEARVPGCRPTQKWDVYSFGVVLLELLTGKSPESSPTTSTSVEVPDLVRWVKKGFEEESPLSEMVDPSLLQEVHAKKEVLAVFHVALACTEGDPEVRPRMKTVSENLERIGT 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0191 708 ProSiteProfiles Protein kinase domain profile. 411 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0191 708 SMART serkin_6 415 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0191 708 Pfam Protein kinase domain 416 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0191 708 Gene3D Ribonuclease Inhibitor 20 190 IPR032675 -
Lele41g0191 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672|GO:0006468
Lele41g0191 708 SUPERFAMILY Protein kinase-like (PK-like) 416 703 IPR011009 -
Lele41g0191 708 Gene3D Ribonuclease Inhibitor 191 288 IPR032675 -
Lele41g0191 708 Gene3D Transferase(Phosphotransferase) domain 1 487 706 - -
Lele41g0191 708 Gene3D Phosphorylase Kinase; domain 1 399 486 - -
Lele41g0191 708 FunFam Os07g0541700 protein 492 573 - -
Lele41g0191 708 SUPERFAMILY L domain-like 22 283 - -
Lele41g0191 708 FunFam Leucine-rich repeat receptor-like protein kinase 21 185 - -
Lele41g0191 708 Pfam Leucine rich repeat N-terminal domain 22 62 IPR013210 -
Lele41g0191 708 CDD STKc_IRAK 417 706 - -
Lele41g0191 708 Pfam Leucine rich repeat 143 204 IPR001611 GO:0005515
Lele41g0191 708 FunFam Leucine-rich repeat receptor-like protein kinase 193 288 - -
Lele41g0191 708 FunFam Leucine-rich repeat receptor-like protein kinase 394 486 - -
Lele41g0191 708 MobiDBLite consensus disorder prediction 288 307 - -
Lele41g0191 708 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 164 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0191 Lele-ChrLele41 1552858 1557143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0191 18 706 Receptor kinase-like Gene Family AT1G67510 72.766 0.0 1016
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele41g0191 Pkinase 3.6e-30 CL0016