Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0189 ATGGGAAACTATAATCGGTTTGCCGAAAAGTTTCCCACAAATGAAGGAAGAAAAAGACCAATATCTGGTTCCTTCGTCGTCTCCTTCATTCTTGTTCTTCAAGTTCTGGCATTTACGTTTCAACCAGTCTCAGGAGGAGGAGGCCATTCGTGGGATGGTGTGATTGTTACGCAAGCTGATTACCAGGCTCTGAGAGCAATAAAGCAAGAATTCATCGATTCCAGAGGAGTTCTGAGGAGCTGGAATGACAGTGGAATTGGAGCTTGTTCTGGTGGGTGGGCAGGAATCAAGTGTGCCAAGGGACAGGTTATAGCAATCCAGCTTCCATGGAGGGGATTGGGTGGTAGAATTTCCAACAAAATCGGAACCCTTCAAGCTCTTAGGAAGCTGAGTCTACACGACAATGTACTAGGTGGTCCTGTCCCTGGGTCTCTTGGCTTCCTTCCTAATCTCAGAGGAATCTACCTCTTCAACAATAGGCTTTCAGGTTCTATCCCTCCTTCTATTGGCAGGATTAGCCCAATTCTTCAGTCTATTGATCTTAGCAATAATTCTCTCTCAGGTACTATCCCTCCAAGCTTAGCAAACTCTACTAGATTATATAGGCTCAATTTGAGCTTTAACTCTTTTTCTGGGTCCATTCCTAGACCTTTCACTATGGCTCCTTCTTTAACTATTCTTGCTCTTCAACACAACAATCTTTCTGGTTCTATCCCAGATTCTTGGGGTAGTGAAATGGGAAAAAACCAAACTTACCAACTTCAATTCTTGACCCTTGATCACAATCTCATTTCTGGAACCATTCCTGTTTCTCTGAGTAAGATGGGTTCTCTCCAAGAGATTTCTCTGAGCCATAACCAGATTAAAGGGTCTATTCCAAGTGAGCTTGGTGGGCTTTCAAGGCTTCAAACTCTTGATCTATCAAACAATGGCATTAATGGTAGCTTTCCAGATAATTTTGACCGGTTAAAAAGCCTTACTGTGCTTAACCTGAAGAATAATAAGCTTGAGGGTGAAATCCCATCAACAATTGGGAACATCTCAGTAATCACCCAGATTGATTTCTCCGATAATAAACTTGTGGGGGAGATTCCAGATTCACTTGCCAAACTTGCAAATTTGACCACTTTTAATGTTTCTTACAACAATCTATCTGGCCTTGTCCCATCCCTCCTCTCCAAAAGATTCAATTCTAGCTCTTTTGCTGGGAATCTCCAACTCTGTGGGAAAAGAGCAGCATCTAAAGAAAAGAATGGGAATAGTGCCAAAACATCGACTGCTGCTAGTACTGCAAGAAGTGCAGGAAAAGGAGGTGAAGTTGAATCAGGAGGGGAAGCAGGAGGGAAGCTAGTTCACTTTGATGGGCCATTTGTTTTTACAGCTGATGATCTCTTGTGTGCTACTGCTGAGATTATGGGAAAAAGTTCTTATGGAACAGCGTACAAGGCAACATTAGAGGATGGAAACCAGGTTGCTGTGAAGAGGTTGAGGGAGAAGACAACCAAAGCACAGAAGGAATTTGAAACTGAGGTTGCTTCACTCGGCAAAATTAGACACCCAAATCTTTTGGCACTTAGAGCATACTACTTGGGACCAAAGGGAGAGAAGCTTCTTGTCTTTGATCACATGACCAAAGGAAGTCTAGCATCATTCCTCCACGCTAGGGCCCCTGAAATTGTCATAGACTGGCCAACAAGGATGAGAATAGCCCTTGGAGTGACACGTGGCCTATGCTACCTACATACACAAGAGAACATAGTACATGGAAATCTCACCTCAAGCAATGTACTCTTAGATGAGCAGACAAATGCCCACATTACAGACTTTGGTCTCTCAAGACTAATGACCACATCAGCAAACAGCAACATCATAGCCACTGCAGGAAACCTCGGATACAATGCCCCAGAGCTGACAAAGACCAAGAAACCAAACATAAAAACTGATTTGTATAGCCTTGGAGTCATCATTTTGGAGCTCTTAACTGGAAAACCACCTGGTGAACCTACCAATGGCTTGGATTTGCCACAGTGGGTTGCTTCAATTGTGAAAGAAGAATGGACTAATGAAGTGTTTGATTTGGAGCTTATCAGGGATACACCAACTATAGGCGATGAACTGCTTAATACTCTGAAATTAGCTCTTCATTGTGTGGATCCATCCCCAGCTGCTAGGCCTGAAGTTCAGCAGATTCTTCAGCAACTGGAGGAGATCAGGCCTGAGTCTTCAGTGGATGATGGAGCAAAAGTCCCAGAAACTACTGAGTAA 2265 0.434 MGNYNRFAEKFPTNEGRKRPISGSFVVSFILVLQVLAFTFQPVSGGGGHSWDGVIVTQADYQALRAIKQEFIDSRGVLRSWNDSGIGACSGGWAGIKCAKGQVIAIQLPWRGLGGRISNKIGTLQALRKLSLHDNVLGGPVPGSLGFLPNLRGIYLFNNRLSGSIPPSIGRISPILQSIDLSNNSLSGTIPPSLANSTRLYRLNLSFNSFSGSIPRPFTMAPSLTILALQHNNLSGSIPDSWGSEMGKNQTYQLQFLTLDHNLISGTIPVSLSKMGSLQEISLSHNQIKGSIPSELGGLSRLQTLDLSNNGINGSFPDNFDRLKSLTVLNLKNNKLEGEIPSTIGNISVITQIDFSDNKLVGEIPDSLAKLANLTTFNVSYNNLSGLVPSLLSKRFNSSSFAGNLQLCGKRAASKEKNGNSAKTSTAASTARSAGKGGEVESGGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSSYGTAYKATLEDGNQVAVKRLREKTTKAQKEFETEVASLGKIRHPNLLALRAYYLGPKGEKLLVFDHMTKGSLASFLHARAPEIVIDWPTRMRIALGVTRGLCYLHTQENIVHGNLTSSNVLLDEQTNAHITDFGLSRLMTTSANSNIIATAGNLGYNAPELTKTKKPNIKTDLYSLGVIILELLTGKPPGEPTNGLDLPQWVASIVKEEWTNEVFDLELIRDTPTIGDELLNTLKLALHCVDPSPAARPEVQQILQQLEEIRPESSVDDGAKVPETTE 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0189 754 CDD STKc_IRAK 472 737 - -
Lele41g0189 754 Gene3D Ribonuclease Inhibitor 57 215 IPR032675 -
Lele41g0189 754 Gene3D Ribonuclease Inhibitor 216 314 IPR032675 -
Lele41g0189 754 Gene3D Phosphorylase Kinase; domain 1 472 543 - -
Lele41g0189 754 Pfam Leucine rich repeat N-terminal domain 59 98 IPR013210 -
Lele41g0189 754 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 58 214 - -
Lele41g0189 754 FunFam Leucine-rich repeat receptor-like protein kinase 452 542 - -
Lele41g0189 754 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 245 420 - -
Lele41g0189 754 Pfam Leucine rich repeat 253 312 IPR001611 GO:0005515
Lele41g0189 754 MobiDBLite consensus disorder prediction 734 754 - -
Lele41g0189 754 Pfam Protein tyrosine and serine/threonine kinase 470 734 IPR001245 GO:0004672|GO:0006468
Lele41g0189 754 MobiDBLite consensus disorder prediction 418 432 - -
Lele41g0189 754 Gene3D Transferase(Phosphotransferase) domain 1 544 750 - -
Lele41g0189 754 MobiDBLite consensus disorder prediction 413 442 - -
Lele41g0189 754 Pfam Leucine Rich Repeat 176 195 IPR001611 GO:0005515
Lele41g0189 754 SMART LRR_typ_2 275 298 IPR003591 -
Lele41g0189 754 SMART LRR_typ_2 371 394 IPR003591 -
Lele41g0189 754 SMART LRR_typ_2 323 347 IPR003591 -
Lele41g0189 754 SMART LRR_typ_2 299 322 IPR003591 -
Lele41g0189 754 SMART LRR_typ_2 148 172 IPR003591 -
Lele41g0189 754 ProSiteProfiles Protein kinase domain profile. 466 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0189 754 FunFam Pollen receptor-like kinase 1 543 748 - -
Lele41g0189 754 PRINTS Leucine-rich repeat signature 176 189 - -
Lele41g0189 754 PRINTS Leucine-rich repeat signature 299 312 - -
Lele41g0189 754 SUPERFAMILY Protein kinase-like (PK-like) 470 738 IPR011009 -
Lele41g0189 754 MobiDBLite consensus disorder prediction 738 754 - -
Lele41g0189 754 Gene3D Ribonuclease Inhibitor 315 419 IPR032675 -
Lele41g0189 754 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 250 737 - -
Lele41g0189 754 SUPERFAMILY L domain-like 97 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0189 Lele-ChrLele41 1538811 1542569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0189 49 739 Receptor kinase-like Gene Family AT3G51740 53.137 0.0 746
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele41g0189 PK_Tyr_Ser-Thr 4e-38 CL0016