Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0182 ATGAAGAGAAGGCCAAGAGATTGTGTCCTATTTGTGGGCTTATTATTATACCTAATTACCCTAACTGGATCTGCAACTGTAAGTATACCAGTAGGAGTGATTCTGGATTCGGATTCATCACTTGGTTCCATAGCTCTCAACTGCACAAACATCGCACTCCAAGATTTCTATTCCACACAAGATTCCAATTATACAACCAACCTCAAACTTCATTTCAGTCATTCTGGAAACGATCTCCTCACTGCAGCTTCTGCAGCTTGGGATCTAATAGATAATGAGAAGGTGCATGCGATACTGGGACCTCAAAACTCAGCGCAAGCAATGTATATTGTAGAACTTGGTAACAAATATGATGTACCAGTGATTTGGTTTTCTCCATCTGGTCCTTCTCTGTTGCCACCTCGTTCCCGATTCTTCATCAATTCCAACTCCCCCAGAAGCCATTGCCTTCAGTTCAAAGCCATAGCAGCCATTATCGAAGCTTATAATTGGCAGTCCGTGATTCCCATTTATGAAGAGCCTGAATTCGGCAATGACCTAATTCCATGTCTCACTTACGCCCTGCAAGACATGGACACTCGAGTTCCTTACATAAGTTCCATTAGTCAAAATTCCTCGGATTCTGAAATCACCGAAGAGCTTAACAATATAAAGGGCAAGCGAACATATGTGTTTCTTGCCCATATGACCGTGGAGCTTTGGTCAAAACTTGTGGAACAGGCACAAGATGCAGGCATGATGGGTAAAGGATACGCTTGGATACTTACGCAAGGCCTATCTTCAATGGTAGATCCCAAAGCGAAGGGTATAAAAGTGACAGGCTACATGGATGGTGCTTTAGGTGTGAGGCCATTATTCGTTGCTTCCAACATAACTAGCCGTTTGATTTCCTTAGCGAAAACATTAAGGAAGTACGATAAAAGTCTGTCTCTATACGGCCTGTGGGCTTATGACACTATCACAGCACTGGCCAATGCAGTAGAGAATGCCGGCTTAGTCGAATATAGTCTCACCAGATATAGGAATGGAAGCAGCGTTGAAGTTGCTGATGTAGGAATGCGCTCTGAAACAGGCCCAAGACTTCGCAGAGAAATTCTAAATACTGATTTCCGAGGCCTGTCGGGGAATTTCAGTTTGAGGCAAGAACAACTAGAACCATCGGAAATTGTAGTATACAATGTGAAAGGTCTAAGAGAAATCATCATGGGATATTGGAACCCCGAAAGAGGATTTCATAATCGTAGTGTAGTTGATGAACAAGCCGGTAAATTCAAACTATTGGACCCGACATGGCCGGGTAACACAACGGACAGACCACCAAAGTTGAAAATCGGAGTCCCAAAAACGCATTTTACTGAATTTGTTGATGTTAGTGTAGATGGGCAGAATATATCAGCTACTGGTTTTGCTTTTGATGTGTTTAACAAAGTGGTTGAAGTTTTGCCATTTAATTTATCTTATGTGCTTGTGCCCGTGAACAACACTAATGGAGAGTTGATTCCCTCGAGATATGATGATCTTCTCTGCAACATCACAAGCAAGAATGTTGATGTTATAATTGGAGACATTACAATTCTAAAGAGTCGCACAATGTGTGTTGATTTCACAATGCCGTATTTAGATTCAAGCGTGTCGATGGTGGTAAAGGTGAGGTCCGACGACAAAAGTGGGTGGATCCTGTTCAAACCTTTTCATTGGTCACTTTGGTTAATTCTTGGTGTGATTTTGGTGGGTGCAACTGTTATTGTGTTTATATTGGAAAGAAAATCGAAGAAGGATCCAAATAGCAAATTCAAACTCTTCGCCCACAATCCCTTCCTTATTTACATGAGCGATGTTGAGAATTTGAGAAGTGGGACGTCCAAATGGGTGGTGATAGTGGTGATGTTTCTGTTGGGCTTAGTATTGCAAATTTACACAGCAAATTTGACGTCATTTTTAAATGAGAGGACAATGGCAAAGCCTCCTCCATGGAAGGATGTGCAAGAGATTAAAAGGAGCAATAAGTCAGTGGGATATCAAAGCGATTCCTGGGTGAAAGATCTTCTGATAAACCAAATGGGATTGAAGAAAGAACAGTTGAAGCCTTTAGGAAGTCGTGAAGATTACAAGAGAGCATTATCAAATGAAGAAGACAAAGAAAAACGAGTGGATGCTATTTTTGATGAAACTCCTTATCTCATGCTCTTCCTTTCCAATTGCTCTTCTTGTAAGATGACAGGACCAATCTACAAAGCTGGTGGATTTGCCTTTGCTTTTCCGAAGAATTCTCCCTTGGTCTCGAATTTTTCAGCTGTAATATTACAAGTGACTCAAAATGTTATGAAGTTTCGTGACATGAAGAACAACATATCTTTACCCGTCACCATTGACAAATCAGAATTCAAAAGTGATGTTGAGACACGAGGTTTGACTATAGATGACTTTGGAGGTCTTTTCACGATAGTATTGATTGTTTTAGTTCTCTTCGTCAGCCTTTCAATTCTTAAAGTTACTTATTTCGCTGTCTGGTTGCATAACAAATTTGTTTCATTCTTAAGTCCTTCCGGTGGAGTTATATTAATTAGACGCTAG 2574 0.4079 MKRRPRDCVLFVGLLLYLITLTGSATVSIPVGVILDSDSSLGSIALNCTNIALQDFYSTQDSNYTTNLKLHFSHSGNDLLTAASAAWDLIDNEKVHAILGPQNSAQAMYIVELGNKYDVPVIWFSPSGPSLLPPRSRFFINSNSPRSHCLQFKAIAAIIEAYNWQSVIPIYEEPEFGNDLIPCLTYALQDMDTRVPYISSISQNSSDSEITEELNNIKGKRTYVFLAHMTVELWSKLVEQAQDAGMMGKGYAWILTQGLSSMVDPKAKGIKVTGYMDGALGVRPLFVASNITSRLISLAKTLRKYDKSLSLYGLWAYDTITALANAVENAGLVEYSLTRYRNGSSVEVADVGMRSETGPRLRREILNTDFRGLSGNFSLRQEQLEPSEIVVYNVKGLREIIMGYWNPERGFHNRSVVDEQAGKFKLLDPTWPGNTTDRPPKLKIGVPKTHFTEFVDVSVDGQNISATGFAFDVFNKVVEVLPFNLSYVLVPVNNTNGELIPSRYDDLLCNITSKNVDVIIGDITILKSRTMCVDFTMPYLDSSVSMVVKVRSDDKSGWILFKPFHWSLWLILGVILVGATVIVFILERKSKKDPNSKFKLFAHNPFLIYMSDVENLRSGTSKWVVIVVMFLLGLVLQIYTANLTSFLNERTMAKPPPWKDVQEIKRSNKSVGYQSDSWVKDLLINQMGLKKEQLKPLGSREDYKRALSNEEDKEKRVDAIFDETPYLMLFLSNCSSCKMTGPIYKAGGFAFAFPKNSPLVSNFSAVILQVTQNVMKFRDMKNNISLPVTIDKSEFKSDVETRGLTIDDFGGLFTIVLIVLVLFVSLSILKVTYFAVWLHNKFVSFLSPSGGVILIRR 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0182 857 Gene3D - 438 557 - -
Lele41g0182 857 Pfam Receptor family ligand binding region 49 395 IPR001828 -
Lele41g0182 857 SUPERFAMILY Periplasmic binding protein-like II 438 773 - -
Lele41g0182 857 Gene3D - 51 386 - -
Lele41g0182 857 PIRSF IGluLR_plant 5 843 IPR017103 -
Lele41g0182 857 Gene3D - 145 411 - -
Lele41g0182 857 SUPERFAMILY Periplasmic binding protein-like I 29 433 IPR028082 -
Lele41g0182 857 Pfam Ligand-gated ion channel 774 819 IPR001320 GO:0015276|GO:0016020
Lele41g0182 857 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 31 828 - -
Lele41g0182 857 Pfam Bacterial extracellular solute-binding proteins, family 3 464 773 IPR001638 -
Lele41g0182 857 Gene3D - 558 680 - -
Lele41g0182 857 SMART GluR_14 443 782 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0182 Lele-ChrLele41 1473919 1478329 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0182 9 772 Ion Channels AT2G29120 34.717 3.15e-131 414