Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0178 ATGGCAGAAATGCAGAAAAGGCAAAGAGAACCTCTCGTATTTGTGGGCTTATTATGCCTAATCACCCTAACTGAGTCTGCAACTGTAAGAAGAACACGATCCCCTGTAGCTATACCAGTAGGAGTGATTCTGGATTCGGATTCATCACTTGGTGACATGGCTCTCAACTGCACCAACATCGCACTCCAAGATTTCTATTCCACACATCATTCCTATGCAACCAGGCTCCAACTTCATTTCAGGGATTCTGGAAATGACCTCCTCACCACAGATTCTGCAGCTTGGGATCTAATAATTAATGAAACGGTGCATGCAATCGTGGGACCTCAAAACTCAGAGCAAGCAAGGTTTGTTGTTGAACTTGGCAATAAGTATGATGTGCCTGTGATTTGGTTTTCTCCATCTGCTGGTCCTTCTCTGTTGCCACCTCGTTCCGGATTCTTCATCAACTCCAACTCCACCAGAAGCCATTGCCTTCATGCCGTTCGTCATGATTTCACGGATTCTCAAATCACCCAAGAGCTTAACAACATAAAAGGCAAGCGAACATGTGTGTTTGTTGCCCATATGACAGTGCAGCTTTGGTCAAGACTGGTGAAACTTGCACAAAATGCAAGTATCATGAGTGAAGGTTACGCTTGGATACTTACGCAAGGCCTATCTTCTGTGATAGATCCAGAAGCTAAAGATATAAAAGTGAAAGGCTTCATGGATGGTGCTTTGGGTGTGAGGCCATCATTGGTTGTTCCCTACAAAACTAAAATTGAGCGCGTTTCCTTAGCGAGATCATTATTGAAGTACCATAAAACTTTCTCTCTTTATGGCTTGTGGGCTTATGACACTATCACAGCATTGGCCAAAGCGGTAGAGAATGCCAACTTAGTCAACTCTAATGCAAGCAGAGTTGATCTTCGCGAAGCAATTAAGAATACTAATTTCCCAGGCCTGTCAGGGAATTTCAGTTTGAACCAAGGACAACTACAACCATCACAAGAAGTTGTAGTATACAATATAGTGGACCAAAAAGAAAGGATCATTGGATATTGGAGCCCCGAAAGAGGACTTCATCAAAATCACAGTGGAGTTGGTGAACCAGCTGGGAAATTCAAACTAAGGGACCCGATATGGCCGGGTCACACAATGGAGAGACCACCAAAGTTGAAAATTGGGGTCCCAAAAACCCATTTTACTGAATTTGTTCATGTTTATGGAGAAGGGGAGGATATATCAGTTATTGGTGGCTTTGCTGTTGATGTGTTTAAAAAAGTGGTTGAGGTTTTGCCATTTCCTTTATCTTATGAGTTTGTGCCCCTGTACAACATTAATCCCTATGATGATCTTCTCTGCCAGATCACGGACAGGGCAAGTTTTCATTCATTTCTGATTTTGCTTTCAGTTGTTATACTTTATCGGCTTTTGTATTTCTCAGTTTCTTTACGCTTGAATGTTGATGTTATAATTGGAGACATAACAGTTGTAGGGAATCGCACAAAATGTATTGACTTCACAATGCCGTATTTAGATTCAAGCGTGGCGATGGGGATAAAGATGGGGTACGATCCCAAAAGTGAGTGGATCCTCTTGAAACCTTTTGATCAGGATCTTTGGTTAATTCTTGGTGGGATTATAGTGGGTGCAACTGTTATTATAATTATATTGGAAAGAAAAGGAAAGGATGATGATGAGAGCAAATTCAAACACTTCGTCCGCAATCCCTTCCTTATTTACATGAGTGATGTTGAGGATTTGAAAAGTGGCAAGTCTAAATGGGTGGTGATAGTGGTCACTTTTCTGTTGGGCATAGCAGTGCAAATTTACACTGCAAATTTAACATCAATTTTAACGGGAAGGACAATGGCAAAGCCTTCTCCATGGAAGGACTTGAAAGAGATTAAAAGGAACAATGTGTCAGTGGGATATCAAAGCGATTCCTGGGTGAAAGATCTTCTGATAAACCAAATAGGATTGAAGATGGAACATTTGAAACCTTTACGAAGTCTTGAAGAGTACGATGAAGCATTATCAAAGGGAACCGAAAATGGAGTTCAAGACAAAGGAAGGAGGGGATCTGAGATGGTGCGATTTTGA 2088 0.4148 MAEMQKRQREPLVFVGLLCLITLTESATVRRTRSPVAIPVGVILDSDSSLGDMALNCTNIALQDFYSTHHSYATRLQLHFRDSGNDLLTTDSAAWDLIINETVHAIVGPQNSEQARFVVELGNKYDVPVIWFSPSAGPSLLPPRSGFFINSNSTRSHCLHAVRHDFTDSQITQELNNIKGKRTCVFVAHMTVQLWSRLVKLAQNASIMSEGYAWILTQGLSSVIDPEAKDIKVKGFMDGALGVRPSLVVPYKTKIERVSLARSLLKYHKTFSLYGLWAYDTITALAKAVENANLVNSNASRVDLREAIKNTNFPGLSGNFSLNQGQLQPSQEVVVYNIVDQKERIIGYWSPERGLHQNHSGVGEPAGKFKLRDPIWPGHTMERPPKLKIGVPKTHFTEFVHVYGEGEDISVIGGFAVDVFKKVVEVLPFPLSYEFVPLYNINPYDDLLCQITDRASFHSFLILLSVVILYRLLYFSVSLRLNVDVIIGDITVVGNRTKCIDFTMPYLDSSVAMGIKMGYDPKSEWILLKPFDQDLWLILGGIIVGATVIIIILERKGKDDDESKFKHFVRNPFLIYMSDVEDLKSGKSKWVVIVVTFLLGIAVQIYTANLTSILTGRTMAKPSPWKDLKEIKRNNVSVGYQSDSWVKDLLINQIGLKMEHLKPLRSLEEYDEALSKGTENGVQDKGRRGSEMVRF 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0178 695 Pfam Receptor family ligand binding region 155 334 IPR001828 -
Lele41g0178 695 Pfam Receptor family ligand binding region 58 145 IPR001828 -
Lele41g0178 695 SUPERFAMILY Periplasmic binding protein-like II 482 678 - -
Lele41g0178 695 Gene3D - 261 326 - -
Lele41g0178 695 Gene3D - 152 260 - -
Lele41g0178 695 Gene3D - 526 647 - -
Lele41g0178 695 Gene3D - 30 151 - -
Lele41g0178 695 SUPERFAMILY Periplasmic binding protein-like I 38 385 IPR028082 -
Lele41g0178 695 Gene3D - 383 525 - -
Lele41g0178 695 PANTHER OS06G0188250 PROTEIN 14 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0178 Lele-ChrLele41 1443983 1448495 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0178 14 678 Ion Channels AT2G29120 29.827 9.82e-89 296