LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele41g0177	ATGAAATCAATGGCAGAGTTGCAGAAAAGCTTCAAAGCATCTTCTGTATTAAGTGAGAGTGTTCTTCTCTTAGTATTATTATTATGGCTTAGCATCACAGTGAGACCTTCCATGGCGGCCACAAGAATAGTACCAGTAGGAGTAATTCTTGATCTGAATTCAAAACTTGGTTACACGGTTAACAACAGCCTCGCCCTCGCCGTTGAAGATTACTATTCCGATCATAAGGATACAGCCACCAAGATCGAGCTGATAGTCCGGAATGTTCCTCAGAACGATGTTGTCGCTGCGGCAGAAAAAGCTTTTCATCTAATAAAGAAAGAAAAAGTGCGTGCCATATTGGGGCCCCAGAATTCAGAGCAAGCAATGGAAATAGTGAAACTTGGTGAGAAATCCCAAGTACCAGTTATTTGGTTTCCCATAACTGGTCCTTCTCTTCTTCCACCTCCTTCCCCATCCTCCGATAAAGGCCTTAATTGCTATCAGTTCCACGCCATAGCCGACACTATTAAAGCTCTTGGCTGGCAATCAATCGTCCCCATTTATGAACAAACTGAATATGGCAGCCACCTTATTCCATGCCTCACCAATGTCTTGAAAGCTATGGGCATTCAAATGGCTAACGTCACTTCCATTGATTCATCAAATTCAGAAAATCTTGGACTTATTAACGCCACTCTCGACGAGCTAAACAACATGCGAACACATGCATTTCTTGTCCATATGAGCAGGGATTTCGGAGCCAGATTTATAAAGTCTGCACAAGAAAGAGATATGATGGATGAAGGATATGCTTGGATACTTACCCAAGGGCTATCTTCTTTGACGGATCCTAGAGTTCCAGTCCAGAGAAAATTGTTTTATCCCGACAAAACATTTCAATATTTTACTGATAGTGTTCGTTTGGGAAGATTCATGCAAGGTGCATTAGGAGTGAGGCCAATAATGAATATTGGGAATAAAACACCAGAGGGTAGGGAGATAGAGAAGAAGTTCTCTGCTAGGTTCAACAGTCTCCTAACTACATATGGATGGTGGGCTTATCACACAATCGAAGCATTGGCTATGGCACTAGAGAAGCCAGGCACAGACAATAATGGCCCAACCCTTCGCAGTAAAATTCTGGCTACTAATTTCACAGGCGTGTCAGGGGTAAATTTTGATTTAAGTAAAGGACAGCTACATCAATCGGTGCTCGAAATTTACAATGTGGTAGGAGACACAGAAAGGGTCATCGGATATTGGAGCCCTGAAACTGGACTTGTTCAAGATTATGGTAAAGGTGGTGAGATATCCGGTGAATACCAACGAAAGGTTCCACGGTGGGCTGGTGACACATTGGATAAACTCCCAAATTCGAGAATTGGAATCCCAACAACAAATTATTTTCCTGAACTCCTGAATGTATACAGTTATAGTAAAGTCCGGATTGATGGCTTTTCTATTGATGTGTTCTTGAAAGCTGTCGATGTTTTGCCATTTCCATTTAATAATTATGAGTTTGTTCCCTTGCCGAAGATGACCTATGATGATATTCTCTGCAGACAAATGAAAGAGAAGGGCCTTGATGCTGTAATCGGAGACATCACAATTGTGGCAAATCGCGCAGAATGTGTTGACTTCACGCTGCCGTATTTAGATTCAAGTGTAGCAATGGTGGTAAAGGTGAAGACCTCCACAAATGTTACGGAGAAGTTTGCAAGCAGAGCTGCAGGATGGATGGTGATACTGACGTCATTCCTATTCATCTTAGTAGTGCAAGTTTACACAGCGAATTTAACTTCAATTTTAACACAAGGACAAATGAAAGGGCCTTCATTTAAGGACAAAGACGAGATCATCAAAGGTAGCAATGTGTCGGTGGGATATCGAAAAGGGTCGTGGGTAAGAAGGTTTCTGATTGAACAAATAAGAATCAAGGACGATCAGTTAAAGGCTTATACAAGTCACGAAGAATACGATGAAGCATTGTCAAAGGGAACTGAAAACGGAGGAGTGGATGCTGTTTTTGATGAAATTCCTTATCTCACGCTCTTCCTCTCCAAATATAACTCCCGCTTCACCATGACAGGGCAAATCTACAAAAGTGGTGGATATGCCTTTGCATTCCCAAAGAAATCTGGCATGACCTCGCATTTCTCAGATGCAATCTTAAAAGTGACTCAAGATGTGGAGCCATATCGCGCCTTGATGGCCAAGAACTCCTTACCAACCTCCATTGAAGATTGGGAATTTGAAGATCAAAGTGATACAGAGATAACAAGTTTGAAAATAGCTTACTTTGGAGGCCTTTATCCTGTTCTATTATCCATTGTGGCTCTCTTTTTAGGTCTTTCCATTATAGATCCATTAGTGATTCAACGGTTTCGTGAGAAGCTTTCCAGGTGA	2388	0.4175	MKSMAELQKSFKASSVLSESVLLLVLLLWLSITVRPSMAATRIVPVGVILDLNSKLGYTVNNSLALAVEDYYSDHKDTATKIELIVRNVPQNDVVAAAEKAFHLIKKEKVRAILGPQNSEQAMEIVKLGEKSQVPVIWFPITGPSLLPPPSPSSDKGLNCYQFHAIADTIKALGWQSIVPIYEQTEYGSHLIPCLTNVLKAMGIQMANVTSIDSSNSENLGLINATLDELNNMRTHAFLVHMSRDFGARFIKSAQERDMMDEGYAWILTQGLSSLTDPRVPVQRKLFYPDKTFQYFTDSVRLGRFMQGALGVRPIMNIGNKTPEGREIEKKFSARFNSLLTTYGWWAYHTIEALAMALEKPGTDNNGPTLRSKILATNFTGVSGVNFDLSKGQLHQSVLEIYNVVGDTERVIGYWSPETGLVQDYGKGGEISGEYQRKVPRWAGDTLDKLPNSRIGIPTTNYFPELLNVYSYSKVRIDGFSIDVFLKAVDVLPFPFNNYEFVPLPKMTYDDILCRQMKEKGLDAVIGDITIVANRAECVDFTLPYLDSSVAMVVKVKTSTNVTEKFASRAAGWMVILTSFLFILVVQVYTANLTSILTQGQMKGPSFKDKDEIIKGSNVSVGYRKGSWVRRFLIEQIRIKDDQLKAYTSHEEYDEALSKGTENGGVDAVFDEIPYLTLFLSKYNSRFTMTGQIYKSGGYAFAFPKKSGMTSHFSDAILKVTQDVEPYRALMAKNSLPTSIEDWEFEDQSDTEITSLKIAYFGGLYPVLLSIVALFLGLSIIDPLVIQRFREKLSR	795

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele41g0177	795	PANTHER	IONOTROPIC GLUTAMATE RECEPTOR	45	586	-	-
	Lele41g0177	795	Gene3D	-	38	165	-	-
	Lele41g0177	795	Gene3D	-	451	571	-	-
	Lele41g0177	795	SUPERFAMILY	Periplasmic binding protein-like I	36	421	IPR028082	-
	Lele41g0177	795	SMART	GluR_14	454	726	IPR001320	GO:0015276\|GO:0016020
	Lele41g0177	795	Gene3D	-	592	697	-	-
	Lele41g0177	795	SUPERFAMILY	Periplasmic binding protein-like II	474	723	-	-
	Lele41g0177	795	Gene3D	-	166	355	-	-
	Lele41g0177	795	Pfam	Bacterial extracellular solute-binding proteins, family 3	472	724	IPR001638	-
	Lele41g0177	795	Gene3D	-	588	723	-	-
	Lele41g0177	795	Pfam	Receptor family ligand binding region	61	406	IPR001828	-
	Lele41g0177	795	FunFam	Glutamate receptor	651	699	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele41g0177	Lele-ChrLele41	1433976	1438911	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele41g0177	44	725	Ion Channels	AT2G29120	31.218	7.77e-90	301