Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0176 ATGGCTCTCAGCTGCATCAACATCGCACTCCAGGATTTCTACTCTGAAAATGATTCCTACTCAACCAAACTCCAACTTCATTTCAGGGATTCTGGAAAAGACCTCACCACTGCAGCTTCTGCAGCTTGGGATCTAATAAATAAGGAAAAGGTGCATGCGATCGTGGGACCTCAAAACTTAGAGCAAGCAAGTTCTGTTGTTGAACTTGGTAACGTGTTTTATGTACCTGTGATTTGGTTTTCTTCATCTGGTCCTTCTCTTTTACTACCTCGTTCCCCATTCTCCATCCACTCCAACTCCAACAGAAGCCATTGCTTTCAGTTCAGAGCTATAGCAGCGATTATAGAAGCTTATCATTGGCAGTCTGTGATCCCCATTCATGAAGAGACAGAATTCGGCAATGACCTAATTCCATGTTTCTCTTATGCCTTTCATGGCATGGACACTCGAGTTCCTTACATAAGTGCCATTAGTCAAAAGTTCAAGGATGATGAAATCACCAAAGAGCTTAACAAGATAAAAGACAAGCAAACATATGTGTTTGTTGCCCATATGACCGTGGAGCTTTGGTCAAGACTATTGAAATATGCACAAAAAGCAGGGCTGATGAACAAAGGATACGCTTGGATACTTACGCAAGGCCTATCTTCTGTGGTAGATCCTGAAGCAAAAGGCTACATGGAAGGGGCTTTGGGTGTGAGGCCATCATTGGTTGTTTCAGACATAAGTAAAAGTAAGCGCGATTCCTTAGCGACAACATTAATGTCTAAGTACGATAAAACTATGTCTCTATATGGCCTGTGGGCTTATGACACTATCACAGCTTTGGCCTATGCTGTAGAGAATGCCGGCTTAGTCAGTTCTAATGAAAGCAGAGTTGATCTTCGCAACGAAAAAGGCCCAAAACTTCGGAGAACAATTCTTGATACTGATTTCGAAGGCCTGTCAGGGAATTTCAGTTTGAGGGAAGGACAACTAGAACCATCGGAAGTTGAAGTATACAATAATGTGGAAGGTCAAGGAGCAAGTATCATTGGAAGTTGGAGCCCCGAAAGAGGACTTTTTCAAAATGGCAGAGTAATTGGTGAACCGGCTGGTACATACAATCTAAGCGACCCGACGTGGCCGGGTAACACAACGGAGAGACCACCAAAGTTGAAAATTGGGGTCCCTAAAACCCATTTTACTGAATTTGTTAATGTTTCTGGAGAAGGGGAGGATATATCAGTTATTGGTGGCTTTGCTGTTGATGTGTTTAAAAAAGTGGTTGAGGTTTTGCCATTTCCTTTATCTTATGAGTTTGTTCCCCTGAACAACACTAATCCCTATGATGATCTTCTCTGCCAGATCACAGACAAGAATCTTGATATTATAATCGGAGACATAACAACTATAGAAAGTCGCACAAATTGTGTTGACTTCACATTGCCGTATTTATACTCAAGCGTGGCAATGGTGGCAAAGGTGAGGTCCGACACCAAAAGTGTGTGGACCCTCTTCAAACCTTTTGATCCCTATCTTTGGTTAATTCTCGGTGGGATTTTTGTGGGTGCAACTGTTATTGTGATTATATTGGAAAGAGAAAAGAAGGATGATAAAGAAAGCAAATTCGACGACTTTGTTCGCAATCCCTTCCTTATTTACAAGAGCGATGTAGGGGAGGATTTGAGAAATCGCACGTCCAAATGGGTGGTGATAGCGGTCATGTTTCTGTTGACCATAGCAGTGCAAGTTTACACTGCAAATTTGACATCAATTTTATCAGAGAGGACAAAGGAAAAGCCTTCTAAATGGAAGGACGTGCAAGAGATTAAAAGGAATAATCTTTTAGTGGGATATCAAAGCGATTCCTGGGTGGAACGACTTCTAACTGGCCAAATGGGATTCCAAAGCAATAAGACACAGCCTTTAAGAAGCCTTGAAGATTACGATGACGCATTAACAAATGGTGTTGAGGCTATTTTTGACGAAACTCCTTATCTCATGCTCTTGCTTTCCAAATGCGATTCTTGCAAGATCTCAGGACCAATCTACAAAACTGGTGGATTTGCCTTTGCATTCCCAAAGAATTCTATCTTAATGAAGAGGATGCGCCGTCTCAAATCAAATGTCTAG 2115 0.418 MALSCINIALQDFYSENDSYSTKLQLHFRDSGKDLTTAASAAWDLINKEKVHAIVGPQNLEQASSVVELGNVFYVPVIWFSSSGPSLLLPRSPFSIHSNSNRSHCFQFRAIAAIIEAYHWQSVIPIHEETEFGNDLIPCFSYAFHGMDTRVPYISAISQKFKDDEITKELNKIKDKQTYVFVAHMTVELWSRLLKYAQKAGLMNKGYAWILTQGLSSVVDPEAKGYMEGALGVRPSLVVSDISKSKRDSLATTLMSKYDKTMSLYGLWAYDTITALAYAVENAGLVSSNESRVDLRNEKGPKLRRTILDTDFEGLSGNFSLREGQLEPSEVEVYNNVEGQGASIIGSWSPERGLFQNGRVIGEPAGTYNLSDPTWPGNTTERPPKLKIGVPKTHFTEFVNVSGEGEDISVIGGFAVDVFKKVVEVLPFPLSYEFVPLNNTNPYDDLLCQITDKNLDIIIGDITTIESRTNCVDFTLPYLYSSVAMVAKVRSDTKSVWTLFKPFDPYLWLILGGIFVGATVIVIILEREKKDDKESKFDDFVRNPFLIYKSDVGEDLRNRTSKWVVIAVMFLLTIAVQVYTANLTSILSERTKEKPSKWKDVQEIKRNNLLVGYQSDSWVERLLTGQMGFQSNKTQPLRSLEDYDDALTNGVEAIFDETPYLMLLLSKCDSCKISGPIYKTGGFAFAFPKNSILMKRMRRLKSNV 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0176 704 Pfam Bacterial extracellular solute-binding proteins, family 3 411 696 IPR001638 -
Lele41g0176 704 Gene3D - 382 495 - -
Lele41g0176 704 SUPERFAMILY Periplasmic binding protein-like II 382 696 - -
Lele41g0176 704 SMART GluR_14 387 702 IPR001320 GO:0015276|GO:0016020
Lele41g0176 704 Pfam Receptor family ligand binding region 4 335 IPR001828 -
Lele41g0176 704 Gene3D - 106 272 - -
Lele41g0176 704 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 2 698 - -
Lele41g0176 704 SUPERFAMILY Periplasmic binding protein-like I 7 377 IPR028082 -
Lele41g0176 704 Gene3D - 496 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0176 Lele-ChrLele41 1420634 1425238 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0176 1 704 Ion Channels AT2G29120 32.483 2.22e-113 362