Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0175 ATGGCAGAGTTGCAGAAAAGCTCCAAAGCTTCTCTCTTAAGTGTCATTCTGGTCTTACTGTTATGGCTTAGCATCACAGCAAGACCTTCCATGGCGGCCCCAAAAAATGTAACAGTAGGAGTCATTCTTGATCTGGGTTCAGAATTTGGTAAAATGGTGAACAACAACCTCCATTTCGCAGTCGAAAATTACTATTCCAATCATACCAATACAACCGCCAAGATCCACCTTATAGTCCGGAATGTTTCTCAGAATGACTTCCTCAAGCTGGAAATAGAAGCTTCTAATCTAATAAAGAAAGATAAAGATAAAGTGCGTGCCATATTGGGGCCCCAGAATTCAGAGCAAGCAAGGTTTATATTGAAACTTGGGGAGAAACACCAAGTAGCAGTTATCTGGTTTCCCATAACTGGGCCTTCTCTTTTGCCACCTCCTTCCCTATCCTCCATCTCCTCCGATGATCAATCCCTTAATTGCTATCAGTTCCGAGCTATAGCTGCCACTATTAAAGCTCTTGGGTGGCATTCAATCATCCCCATTTATGAAGACACCGAATATGGCAGTCACCTTCTTCCATGCGTCACCAATGTCTTCAAAGAGAAGGGCATACGAATGGCTAACGTAATTGCCATTGATTTACATTCAACACCTTCTGAAATTAACGGCACTCTCGACAAGTTGAACAGCATGTCAACACATGTATTTCTTGTCCATATGAGCATGGATCTCGGAACAAGATTTATCTTTTCTGCAGAAGCAAAAGATATGATGGTTAAAGGATATGCTTGGATACTTACCCAAGACCTATCTACTTTGACAGATCCTCAATTTCTGCTCAGGAGAAAATCTTCTTTTGATCAAAACATATATTTTCTGTCTCGGAAATCTTTGAAAGGATACATGCAAGGTGCACTGGGAGTGAGGCCAATGGATTTGATTTCTAAAAAAACACCATTCCGTAGGGAGAAAGAGAGGAATTTCTCTGATAGCTTCAGAAGAAGCCTAACTATGTATGGATGGTGGGCTTATCACACAATCGAAGCATTGGCTATGGCACTGGAGAAGCCAGGCACAGACACTGGCCCAAAACTTGCTAGTGAAATTCGGGCCACTAATTTCCAATGCAAGTCAGGGATACCTTTTGATTTAAGAAAAGGACACCTAGGTCATCAATCGGAGTATGAAGTATACAATGTGATAGGACAAAGAGAAAGGATCATCGGATCTTGGACCCCTAAAAAAATTGGAATTGTTCAAAATTATAGTGACGTTGGTGAGACATCTGGTGCATACCTGCTGGAGGATCCACTGTGGCCGGGTGACACATTGGACAAACCACCAAAATTGAGAATTGGAGTCCCCAGAACAAATTTTTTCCGTGAATTTGTGAATGGATATGGTAAGCCGCTGCCTGGTGGCTTTGCTATTAATGTGTTCTTAAAAGCTGTCGAAGCTTTGCCATTTCCATTAAAAAGTGAGTTTGTTCTCTTGAACGAAAGAAGAAGCAATACTACCTATGATGATATTCTCTGCCGCCAAATGAAAGAGGAGAATCTTGATGCTATAATTGGAGACATCACAACTGTGGCACATCGCACAAAATGTGTTGATTTCACGTTGCCGTATTTAGATTCGAGTGTAGCAATGGTGGTAAGGGTGAAGACCTCCACAAGTAGGTGGATCCTCTTCAAACCTTTCAAATGGACACTATGGTTAATTCTTGGTGGGATTTTTGTGGGTGCAACTATTATCATAATTATATTAGAGGGATACAAAACCAACAAAACTAAGGAAACCAACGAATTTCGCTTCAACCCCTTCCTTGTCTACAAGACCAATGTTATGGAGATCAATAAGGCAAGCAAAGCTGCAGGATGGATGGTGATACTGACGTCATTCCTATTCATCTTAGTGGTGCAAGTTTACACAGCGAATTTAACTTCAATTTTAACGCAAGGAAAAATCAAAGGACCTTCATTTGAGGATGAAAACGAGATTAAAAGTAGAAATCTGTGCGTGGGATATCGAAAAGGGTCGTGGGTGAAAGGTTTTCTGATTCACCAAATAAGATTCAAGGATGATCAGTTAAAGCCTTTAGGAAGTCGCGAAGAATACAGTTCAGCATTGTCAAATGGAACCAAAAAAGGAGGAGTGGATGCTATTTTTGACGAAACTCCATATCTCACTCTCTTCCTCTCCAAAAATAAGTCCCAATTTATGATGACAGGAAATATCTACAGAATTGGTGGATTTGCCTTTGCATTCCCAAAGAAATCTAGCCTGACCTCACATTTCTCGAAAGCAATCTTAAAAGTGACTCAAGATGTGGAGCAATATCGCGTGCTGATGGCCAAGAGCTCCTTACCAACCTCCGTTGAAGATTTGGAATTAGAAGACGAAAAGCAGAGGATTGAAGATAATAATAGCAGAAAATTGCAGAAATGCAGAGAAGGCCAAGAGGTTCTCTCTTATTTGTGGGCTTATTATTATGCCTAA 2496 0.4083 MAELQKSSKASLLSVILVLLLWLSITARPSMAAPKNVTVGVILDLGSEFGKMVNNNLHFAVENYYSNHTNTTAKIHLIVRNVSQNDFLKLEIEASNLIKKDKDKVRAILGPQNSEQARFILKLGEKHQVAVIWFPITGPSLLPPPSLSSISSDDQSLNCYQFRAIAATIKALGWHSIIPIYEDTEYGSHLLPCVTNVFKEKGIRMANVIAIDLHSTPSEINGTLDKLNSMSTHVFLVHMSMDLGTRFIFSAEAKDMMVKGYAWILTQDLSTLTDPQFLLRRKSSFDQNIYFLSRKSLKGYMQGALGVRPMDLISKKTPFRREKERNFSDSFRRSLTMYGWWAYHTIEALAMALEKPGTDTGPKLASEIRATNFQCKSGIPFDLRKGHLGHQSEYEVYNVIGQRERIIGSWTPKKIGIVQNYSDVGETSGAYLLEDPLWPGDTLDKPPKLRIGVPRTNFFREFVNGYGKPLPGGFAINVFLKAVEALPFPLKSEFVLLNERRSNTTYDDILCRQMKEENLDAIIGDITTVAHRTKCVDFTLPYLDSSVAMVVRVKTSTSRWILFKPFKWTLWLILGGIFVGATIIIIILEGYKTNKTKETNEFRFNPFLVYKTNVMEINKASKAAGWMVILTSFLFILVVQVYTANLTSILTQGKIKGPSFEDENEIKSRNLCVGYRKGSWVKGFLIHQIRFKDDQLKPLGSREEYSSALSNGTKKGGVDAIFDETPYLTLFLSKNKSQFMMTGNIYRIGGFAFAFPKKSSLTSHFSKAILKVTQDVEQYRVLMAKSSLPTSVEDLELEDEKQRIEDNNSRKLQKCREGQEVLSYLWAYYYA 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0175 831 Pfam Bacterial extracellular solute-binding proteins, family 3 512 777 IPR001638 -
Lele41g0175 831 SUPERFAMILY Periplasmic binding protein-like II 444 775 - -
Lele41g0175 831 SUPERFAMILY Periplasmic binding protein-like I 29 440 IPR028082 -
Lele41g0175 831 Gene3D - 165 351 - -
Lele41g0175 831 Gene3D - 32 164 - -
Lele41g0175 831 Gene3D - 441 558 - -
Lele41g0175 831 Gene3D - 709 751 - -
Lele41g0175 831 SMART GluR_14 450 775 IPR001320 GO:0015276|GO:0016020
Lele41g0175 831 Pfam Receptor family ligand binding region 58 399 IPR001828 -
Lele41g0175 831 Gene3D - 559 681 - -
Lele41g0175 831 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 37 775 - -
Lele41g0175 831 Gene3D - 752 777 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0175 Lele-ChrLele41 1414429 1420556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0175 37 795 Ion Channels AT2G29120 32.182 1.12e-109 356