Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0154 ATGGATCAGATTCATCATTTTCATCATCTTCTTCCGCAGCATCCACAACAACAACATCATCTTCCTCAGCCTCAGCCTGGTATTACCATGAATAACGTCGATGTGAGTAGTGGCGGCGCCGTCGTAGTCGACAGGTTGCCGCAGTGGAGCGTTCAAGAGACGAAGGAGTTTCTGGCGATTCGATCAGAGTTAGATCAGAATTTCATGGAGACAAAGAGGAACAAGCAGCTATGGCAACTCATCTCTAACGCAATGACCGATAAGGGTTACCTTCGAAGCCCAGAGCAGTGCAAGTGCAAGTGGAAAAACCTCGTCACCAGGTACAAGGGATGTGAAACAGCAGAGCCAGAAAGTGTAAGGCAGCAATTCCCATTTTACAATGAACTTCAAGCGATTTTCACTGCGAGGATGCAGAGAATGCTGTGGGCGGAGGCAGAAGGAGGAGGAGGAGCGAAGAAGAAGACGGCGACGGCGGCAATCAACGCGTCGTCGGAAGATGACGAAGACGACAACGAAGAGATAAGCACTGGTCATCATCAGGGAGAGAGGAACTCGAGGAAGAAGATGAAGAGAAGCAAAAGTTACAGTAGTAGCAACAAGTTGAAGGAGACTCTGGAGGAGTTCATGAGACAACAGATTCAGATAGAGACACAGTGGATGGAAGCTTTTGAAGCTCGAGAGAAAGAGAGAAGGATGAAGGAGATGGAGTGGAGACAAGCCATGGAAGCTCTGGAGAATGAGAGGATGATGATGGAGCAGAGATGGAGAGAGAGAGAAGAAGAGAGAAGGATTAGAGAAGAAGCTAGGGCTGAAAGAAGAGACGCTTTAATCACCGCTCTTCTTAACAAGCTATATCGTTAA 861 0.4774 MDQIHHFHHLLPQHPQQQHHLPQPQPGITMNNVDVSSGGAVVVDRLPQWSVQETKEFLAIRSELDQNFMETKRNKQLWQLISNAMTDKGYLRSPEQCKCKWKNLVTRYKGCETAEPESVRQQFPFYNELQAIFTARMQRMLWAEAEGGGGAKKKTATAAINASSEDDEDDNEEISTGHHQGERNSRKKMKRSKSYSSSNKLKETLEEFMRQQIQIETQWMEAFEAREKERRMKEMEWRQAMEALENERMMMEQRWREREEERRIREEARAERRDALITALLNKLYR 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0154 286 ProSiteProfiles Myb-like domain profile. 49 105 IPR001005 -
Lele41g0154 286 Coils Coil 234 261 - -
Lele41g0154 286 FunFam Zinc finger and SCAN domain-containing 20 49 110 - -
Lele41g0154 286 SMART sant 45 107 IPR001005 -
Lele41g0154 286 MobiDBLite consensus disorder prediction 146 199 - -
Lele41g0154 286 PANTHER FI21293P1 23 284 - -
Lele41g0154 286 MobiDBLite consensus disorder prediction 1 26 - -
Lele41g0154 286 CDD GT1 47 112 - -
Lele41g0154 286 Pfam Myb/SANT-like DNA-binding domain 48 132 IPR044822 -
Lele41g0154 286 Gene3D - 49 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0154 Lele-ChrLele41 1183165 1185092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0154 44 286 Trihelix Transcription Factor Family AT5G01380 53.008 2.82e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele41g0154 Myb_DNA-bind_4 1.5e-20 CL0123